Chinese Journal of Lasers, Volume. 47, Issue 2, 207024(2020)

Compressed Sensing STORM Super-Resolution Image Reconstruction Based on Noise Correction-Principal Component Analysis Preprocessing Algorithm

Pan Wenhui, Chen Bingling, Zhang Jianguo, Gu Zhenyu, Xiong Jia, Zhang Dan, Yang Zhigang, and Qu Junle
Author Affiliations
  • Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, Center for Biomedical Photonics, College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen, Guangdong 518060, China
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    Figures & Tables(8)
    Workflow diagram of NC-PCA algorithm
    Image denoising simulation. (a) Original image; (b) image with background noise and shot noise; (c) denoised image obtained by 1--3 principal components; (d) denoised image obtained by 1--6 principal components; (e) denoised image obtained by 1--9 principal components; (f) normalized intensity curves corresponding to dotted lines in Fig.2(a)--(e); (g) PSNR and SSIM curves for denoised images with different principal component numbers; (h) CEVR for denoised im
    Effect of NC-PCA algorithm on images with different SNRs. (a) PSNR curves before and after NC-PCA algorithm processing; (b) ERMS of CSSTORM localization of images
    Photo scintillation images before and after NC-PCA algorithm processing. (a) Original flashing image; (b) denoised image obtained by NC-PCA processing with 1--6 principal components; (c) denoised image obtained by NC-PCA processing with 1--3 principal components
    Comparison of super-resolution results of different algorithms for data reconstruction with different frames. (a) Reconstructed 500-frame data, scale bar: 2 μm; (b) magnified view of Fig.5(a), scale bar: 0.5 μm; (c) magnified view of Fig.5(a) with the data reconstruction using 200 frame, scale bar: 0.5 μm
    Photon number distribution along the dashed lines in Fig.5. (a) First column image in Fig.5(b); (b) second column image in Fig.5(b); (c) third column image in Fig.5(b)
    FRC spatial resolution analysis curves of methods in Fig.5(a). (a) Raw image; (b) K-factor preprocessing; (c) NC-PCA noise reduction and K-factor pre-processing
    Noise reduction effect of outer mitochondrial membrane. (a) Wide-field image of outer mitochondrial membrane; (b) image obtained by CSSTORM reconstruction; (c) image obtained by CSSTORM reconstruction after NC-PCA noise reduction and K-factor pretreatment; (d) magnified image of the rectangle area in Fig.8(c) obtained by CSSTORM reconstruction; (e) magnified image of the rectangle area in Fig.8(c) obtained by CSSTOR
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    Pan Wenhui, Chen Bingling, Zhang Jianguo, Gu Zhenyu, Xiong Jia, Zhang Dan, Yang Zhigang, Qu Junle. Compressed Sensing STORM Super-Resolution Image Reconstruction Based on Noise Correction-Principal Component Analysis Preprocessing Algorithm[J]. Chinese Journal of Lasers, 2020, 47(2): 207024

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    Paper Information

    Category: biomedical photonics and laser medicine

    Received: Oct. 18, 2019

    Accepted: --

    Published Online: Feb. 21, 2020

    The Author Email:

    DOI:10.3788/CJL202047.0207024

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