Infrared and Laser Engineering, Volume. 51, Issue 11, 20220622(2022)

Application of super-resolution microscopy in the study of organelle interactions (invited)

Taiqiang Dai1,2,3,4, Ye Gao1,2,3,4, Ying Ma5, Bolei Cai1,2,3,4, Fuwei Liu1,2,3,4, Boling He1,2,3,4, Jie Yu1,2,3,4, Yan Hou1,2,3,4, Peng Gao5, and Liang Kong1,2,3,4、*
Author Affiliations
  • 1State Key Laboratory of Military Stomatology, Xi’an 710032, China
  • 2National Clinical Research Center for Oral Diseases, Xi’an 710032, China
  • 3Shaanxi Clinical Research Center for Oral Diseases, Xi’an 710032, China
  • 4Department of Oral and Maxillofacial Surgery, School of Stomatology, The Fourth Military Medical University, Xi’an 710032, China
  • 5School of Physics, Xidian University, Xi’an 710171, China
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    Figures & Tables(11)
    Principle of stimulated emission depletion (STED) microscopy[20]
    Principle of structured illumination microscopy (SIM)[26]
    Principle of single molecule localization microscopy (SMLM)[31]
    SIM images of mitochondria (green) and lysosomes (red) contact in wild type living cells[38]
    Mitochondria distribution guided by cytoskeleton during mitosis imaged by GI-SIM[48](Red:Cytoskeleton; Blue:Mitochondria)
    STED showed the mitochondrion-lipid droplet interface. (a) Expression of PLIN5 (red) at interface of mitochondria and lipid droplet; (b) Voxelized rendering of extracted LD, mitochondria and overlapping zones between them (LD (green), mitochondria (red) and computed contact zones (blue))[55-56]
    Time-lapse images of a typical mitochondrial fission and fusion event at an ER-Mito contact site captured by GI-SIM[64]. (a)-(b) Mitochondrial fission mediated by ER; (c)-(d) Mitochondrial fusion mediated by ER
    SIM images showed that SEPN1-devoid cells display less ER-mitochondria contact[68] (WT: Wild type cells; SEPN1 KO: SEPN1 knock out cells)
    • Table 1. Principles and characteristics of three types of super-resolution microscopy

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      Table 1. Principles and characteristics of three types of super-resolution microscopy

      Principlexy resolution/nm z resolution/nm Fluorescent molecules Live cell imagingImage reconstruction
      STEDStimulated emission depletion based on PSF~40~70FreeYesNot required
      SIMStructured illumination~50~250FreeYesRequired
      PALMPhoto activated localization based on photoswitchable fluorescent molecules ~20~50PhotoswitchableYesRequired
      STORMStochastic optical reconstruction based on photoswitchable fluorescent molecules ~20~50PhotoswitchableYesRequired
    • Table 2. Application of super-resolution microscopy in the study of organelle interactions

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      Table 2. Application of super-resolution microscopy in the study of organelle interactions

      Organelle interactionsResearch contentsSuper-resolution microscopyCells
      Mitochondria-lysosomeMitochondria and lysosome contact ( MLC) marks sites of mitochondrial fission and the formation and release of MLC is bidirectionally regulated by mitochondrial and lysosomal dynamic[36]; Endoplasmic reticulum (ER) recruits lysosomes to act in concert at the fission site for the efficient division of mitochondria[37]; The analysis methods of mitochondria-lysosome interactions based on structured illumination microscopy (SIM)[38]; Lysosome-targeted biosensor for the super-resolution imaging of lysosome-mitochondrion interaction based on SIM[39]. SIMHT22 cells; SHSY-5Y cells; HeLa cells; HSF cells
      Mitochondria- nucleusObservation of mitochondria-nucleus contact and the change of expression sites of Sirt4 from mitochondria to nucleus under mitochondrial stress conditions[43-44]. SIMHeLa cells; Pancreaticβcells
      Mitochondria-cytoskeletonMitochondrial morphology and distribution are regulated by cytoskeleton. During mitosis, dense meshwork of subcortical actin cables organizes three-dimensional mitochondrial positioning to ensure both equal and random inheritance of mitochondria in symmetrically dividing cells[48]; Actin maintains microtubule organization, dynamics and stability by affecting tubulin acetylation levels and further regulate mitochondrial distribution[49]; Cytoskeleton regulates fission and fusion of mitochondria[50]. SIM; STEDHela cells; COS-7 cells; HEK293 cells; U2 OS cells
      Mitochondria-lipid dropletObservation of mitochondria-lipid droplets contacts; Overexpression of perilipin5 leads to increased number of mitochondria surrounding lipid droplets[55]. STEDCOS-7 cells
      Mitochondria-Endoplasmic reticulumTubular endoplasmic reticulum regulates mitochondrial fission and fusion[64]; Calcium transients on the sites of mitochondria-endoplasmic reticulum contacts[67]; In SEPN1-related myopathy, SEPN1 deficiency results in less mitochondria-endoplasmic reticulum contacts, calcium contents and damaged oxidative phosphorylation process[68]. SIMCOS-7 cells; U2 OS cells; HeLa cells
      Endoplasmic reticulum-lysosomeLysosomes moved synchronously with local endoplasmic reticulum. The anchorage of lysosomes to endoplasmic reticulum growth tips is critical for endoplasmic reticulum tubule elongation and connection[15]; Endoplasmic reticulum contacts with the edge of lysosome, which promotes the long-distance transportation of lysosome[64]. SIMCOS-7 cells; U2 OS cells
      Endoplasmic reticulum-cytoskeletonEndoplasmic reticulum anchors to microtubules, which guides the formation of new endoplasmic reticulum tubule branches[64]; Endoplasmic reticulum dynamics play important roles in microtubules distribution[15]. SIM; STEDCOS-7 cells; U2 OS cells
    • Table 3. Application parameters of super-resolution microscopy

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      Table 3. Application parameters of super-resolution microscopy

      STEDSIMSMLM
      xy resolution/nm ~40~50~20
      z resolution/nm ~70~250~50
      Temporal resolution5 ms-2 s10-500 ms1 min-1 h
      Light intensityMedium-highLow-mediumLow-medium
      Live cell dynamic imagingMediumGoodPoor
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    Taiqiang Dai, Ye Gao, Ying Ma, Bolei Cai, Fuwei Liu, Boling He, Jie Yu, Yan Hou, Peng Gao, Liang Kong. Application of super-resolution microscopy in the study of organelle interactions (invited)[J]. Infrared and Laser Engineering, 2022, 51(11): 20220622

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    Paper Information

    Category: Special issue-Fluorescence microscopy: techniques and applications

    Received: Aug. 31, 2022

    Accepted: --

    Published Online: Feb. 9, 2023

    The Author Email: Kong Liang (liangkong2014@163.com)

    DOI:10.3788/IRLA20220622

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