Researching | Light Field Microscopic Aberration Correction Based on Deep Learning

Acta Optica Sinica, Volume. 44, Issue 14, 1408001(2024)

Light Field Microscopic Aberration Correction Based on Deep Learning

Changmiao Wang^1,2, Hui Li^1,2、*, Shuiping Zhang^1,2、**, and Yuntao Wu^1,2

Author Affiliations

¹School of Computer Science and Engineering, Wuhan Institute of Technology, Wuhan 430205, Hubei , China

²China Hubei Key Laboratory of Intelligent Robot, Wuhan 430205, Hubei , China

show less

Abstract Get PDF(in Chinese)

Figures&Tables (9)

References (33)

Paper Information

References(33)

[1] Levoy M, Ng R, Adams A et al. Light field microscopy[C], 924-934(2006).

[2] Prevedel R, Yoon Y G, Hoffmann M et al. Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy[J]. Nature Methods, 11, 727-730(2014).

[3] Lin X, Wu J M, Zheng G A et al. Camera array based light field microscopy[J]. Biomedical Optics Express, 6, 3179-3189(2015).

[4] Lu C H, Muenzel S, Fleischer J W. High-resolution light-field microscopy[C], CTh3B.2(2013).

[5] Wang Z Q, Zhu L X, Zhang H et al. Real-time volumetric reconstruction of biological dynamics with light-field microscopy and deep learning[J]. Nature Methods, 18, 551-556(2021).

[6] Ng R, Hanrahan P M. Digital correction of lens aberrations in light field photography[C], WB2(2006).

[7] Gao J R, Li D H, Lai H et al. Measurement of wavefront aberration of lens based on phase measuring deflectometry[J]. Laser & Optoelectronics Progress, 59, 0212001(2022).

[8] So S, Kim M, Lee D et al. Overcoming diffraction limit: From microscopy to nanoscopy[J]. Applied Spectroscopy Reviews, 53, 290-312(2018).

[9] Arines J, Durán V, Jaroszewicz Z et al. Measurement and compensation of optical aberrations using a single spatial light modulator[J]. Optics Express, 15, 15287-15292(2007).

[10] Arias A, Castaneda R. Estimation and compensation of aberrations in spatial light modulators[J]. Journal of Physics: Conference Series, 274, 012060(2011).

[11] Suchkov N, Fernández E J, Martínez-Fuentes J L et al. Simultaneous aberration and aperture control using a single spatial light modulator[J]. Optics Express, 27, 12399-12413(2019).

[12] Su C X, Dong L Z, Fan X L et al. Adaptive optics correction method based on calibration optimisation of wavefront sensor[J]. Chinese Journal of Lasers, 48, 2305001(2021).

[13] Xu L, Jia J Y, Daniilidis K, Maragos P, Paragios N. Two-phase kernel estimation for robust motion deblurring[M]. Computer vision-ECCV 2010, 6311, 157-170(2010).

[14] Heide F, Rouf M, Hullin M B et al. High-quality computational imaging through simple lenses[J]. ACM Transactions on Graphics, 32, 149(2013).

[15] Schuler C J, Hirsch M, Harmeling S, Fitzgibbon A, Lazebnik S, Perona P et al. Blind correction of optical aberrations[M]. Computer vision-ECCV 2012, 7574, 187-200(2012).

[16] Hobson C M, Guo M, Vishwasrao H D et al. Practical considerations for quantitative light sheet fluorescence microscopy[J]. Nature Methods, 19, 1538-1549(2022).

[17] Lebrun D, Touil C E, Özkul C. Methods for the deconvolution of defocused-image pairs recorded separately on two CCD cameras: application to particle sizing[J]. Applied Optics, 35, 6375-6381(1996).

[18] Buddha S S G, Boruah B R. Estimation of point spread function of an optical microscope using stochastic minimization of least square errors[J]. Journal of Optics, 22, 055603(2020).

[19] Lin P D, Johnson R B. Seidel aberration coefficients: an alternative computational method[J]. Optics Express, 27, 19712-19725(2019).

[20] Kumar A, Georgiev S, Salas M et al. Digital adaptive optics based on digital lateral shearing of the computed pupil field for point scanning retinal swept source OCT[J]. Biomedical Optics Express, 12, 1577-1592(2021).

[21] Hillmann D, Pfäffle C, Spahr H et al. Computational adaptive optics for optical coherence tomography using multiple randomized subaperture correlations[J]. Optics Letters, 44, 3905-3908(2019).

[22] Zhu D, Wang R Y, Žurauskas M et al. Automated fast computational adaptive optics for optical coherence tomography based on a stochastic parallel gradient descent algorithm[J]. Optics Express, 28, 23306-23319(2020).

[23] Wu J M, Lu Z, Jiang D et al. Iterative tomography with digital adaptive optics permits hour-long intravital observation of 3D subcellular dynamics at millisecond scale[J]. Cell, 184, 3318-3332(2021).

[24] Wu J M, Guo Y D, Deng C et al. An integrated imaging sensor for aberration-corrected 3D photography[J]. Nature, 612, 62-71(2022).

[25] Lu Z, Cai Y Y, Nie Y X et al. A practical guide to scanning light-field microscopy with digital adaptive optics[J]. Nature Protocols, 17, 1953-1979(2022).

[26] Zheng Y, Chen J J, Wu C X et al. Adaptive optics for structured illumination microscopy based on deep learning[J]. Cytometry, 99, 622-631(2021).

[27] Hu L J, Hu S W, Gong W et al. Image enhancement for fluorescence microscopy based on deep learning with prior knowledge of aberration[J]. Optics Letters, 46, 2055-2058(2021).

[28] Zuo C, Li J J, Sun J S et al. Transport of intensity equation: a tutorial[J]. Optics and Lasers in Engineering, 135, 106187(2020).

[29] Mir M, Bhaduri B, Wang R et al. Quantitative phase imaging[M]. Progress in optics, 133-217(2012).

[30] Jayaweera S S, Edussooriya C U S, Wijenayake C et al. Multi-volumetric refocusing of light fields[J]. IEEE Signal Processing Letters, 28, 31-35(2021).

[31] Zuo C, Chen Q, Sun J S et al. Non-interferometric phase retrieval and quantitative phase microscopy based on transport of intensity equation: a review[J]. Chinese Journal of Lasers, 43, 0609002(2016).

[32] Li H, Yu Y, Peng J et al. Resolution improvement of light field imaging via a nematic liquid crystal microlens with added multi-walled carbon nanotubes[J]. Sensors, 20, 5557(2020).

[33] Kim J, Lee J K, Lee K M. Accurate image super-resolution using very deep convolutional networks[C], 1646-1654(2016).

Tools

Get Citation

Copy Citation Text

Changmiao Wang, Hui Li, Shuiping Zhang, Yuntao Wu. Light Field Microscopic Aberration Correction Based on Deep Learning[J]. Acta Optica Sinica, 2024, 44(14): 1408001

Download Citation

EndNote(RIS)BibTex Plain Text

Set citation alerts for article

Save article for my favorites

Paper Information

Category: Geometric Optics

Received: Feb. 26, 2024

Accepted: Apr. 18, 2024

Published Online: Jul. 17, 2024

The Author Email: Li Hui (lihui00317@163.com), Zhang Shuiping (16030501@wit.edu.cn)

DOI:10.3788/AOS240654

CSTR:32393.14.AOS240654

Topics

laser devices and laser physics

Lasers and Laser Optics

laser manufacturing

Instrumentation, Measurement and Metrology