Acta Optica Sinica, Volume. 44, Issue 14, 1408001(2024)

Light Field Microscopic Aberration Correction Based on Deep Learning

Changmiao Wang1,2, Hui Li1,2、*, Shuiping Zhang1,2、**, and Yuntao Wu1,2
Author Affiliations
  • 1School of Computer Science and Engineering, Wuhan Institute of Technology, Wuhan 430205, Hubei , China
  • 2China Hubei Key Laboratory of Intelligent Robot, Wuhan 430205, Hubei , China
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    Figures & Tables(9)
    Schematic diagram of deep learning light field microscopy aberration correction principle
    PCANet structure. (a) Improved two-path network structure; (b) upsampling convolution module; (c) convolutional block; (d) residual module; (e) attention module
    PCANet decoupling submodule
    Diagram of experimental setup. (a) Device diagram of the light field microscopy acquisition system; (b) schematic diagram of the light field microscopy setup; (c) microlens array calibrationc (local magnification); (d) egg embryo section and onion epidermal cut specimen
    Comparison of resolution plates imaging results. (a) Original aberration result; (b) light field DAO reconstruction result; (c) reconstruction results of the proposed method; (d)(f)(h) enlarged image of central region I; (e)(g)(i) estimated aberration wavefront corresponding to central region I; (j)(l)(n) enlarged image of edge region Ⅱ; (k)(m)(o) estimated aberration wavefront corresponding to edge region Ⅱ; (p) strength curves of marked part in central region I; (q) strength curve of marked part in edge region Ⅱ
    Imaging results of 36 h egg embryo slices. (a) Raw aberration blur intensity input after optical field rendering; (b) single-channel U-Net reconstruction without phase information; (c) method in proposed; (d)(e)(f) locally enlarged images; (g)(h)(i) grayscale histograms corresponding to locally enlarged image; (j)(k)(l) edge contour extractions of three results
    Reconstruction results of different methods. (a) Apical margin region of onion root tip longitudinal section; (b) full field of view region of 72 h egg embryo section; (c) center region of onion root tip longitudinal section
    • Table 1. Ablation experiment verify effect of attention module

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      Table 1. Ablation experiment verify effect of attention module

      SampleAMEpochTraining setPNSR/dB
      36 h egg embryo100600033.16
      ×100600034.09
      72 h egg embryo100600038.71
      ×100600040.15
      Onion root tip1501000028.27
      ×1501000029.01
    • Table 2. Evaluation of reconstruction results of different methods

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      Table 2. Evaluation of reconstruction results of different methods

      MethodOnion root tip72 h egg embryoOnion root tip (central region)
      PSNR /dBSSIMTime /sPSNR /dBSSIMTime /sPSNR /dBSSIMTime /s
      VDSR25.130.84221.0534.130.90231.3829.460.92371.09
      R-Lucy26.960.93465.0237.120.95606.1330.990.93865.18
      Ours29.010.94102.8739.450.96123.4631.610.95012.94
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    Changmiao Wang, Hui Li, Shuiping Zhang, Yuntao Wu. Light Field Microscopic Aberration Correction Based on Deep Learning[J]. Acta Optica Sinica, 2024, 44(14): 1408001

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    Paper Information

    Category: Geometric Optics

    Received: Feb. 26, 2024

    Accepted: Apr. 18, 2024

    Published Online: Jul. 17, 2024

    The Author Email: Li Hui (lihui00317@163.com), Zhang Shuiping (16030501@wit.edu.cn)

    DOI:10.3788/AOS240654

    CSTR:32393.14.AOS240654

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