Acta Laser Biology Sinica, Volume. 30, Issue 4, 325(2021)
Expression, Purification and Crystallographic Study of DNA Glycosylase TagA of Mycobacterium tuberculosis
[1] [1] GOPINATH V, RAGHUNANDANAN S, GOMEZ R L, et al. Profiling the proteome of Mycobacterium tuberculosis during dormancy and reactivation [J]. Molecular and Cellular Proteomics, 2015, 14(8): 2160-2176.
[2] [2] HARDING E. WHO global progress report on tuberculosis elimination [J]. Lancet Respiratory Medicine, 2020, 8(1): E3.
[3] [3] HUANG L, NAZAROVA E V, RUSSELL D G. Mycobacterium tuberculosis: bacterial fitness within the host macrophage [J]. Microbiology Spectrum, 2019, 7(2): 127-138.
[4] [4] VEEN S, TANG C M. The BER necessities: the repair of DNA damage in human-adapted bacterial pathogens [J]. Nature Reviews: Microbiology, 2015, 13(2): 83-94.
[5] [5] KROKAN H E, BJORAS M. Base excision repair [J]. Cold Spring Harbor Perspectives in Biology, 2013, 5(4): a012583.
[6] [6] DALHUS B, LAERDAHL J K, BACKE P H, et al. DNA base repair—recognition and initiation of catalysis [J]. FEMS Microbiology Reviews, 2009, 33(6): 1044-1078.
[7] [7] CHATTERJEE N, WALKER G C. Mechanisms of DNA damage, repair, and mutagenesis [J]. Environmental and Molecular Mutagenesis, 2017, 58(5): 235-263.
[8] [8] SVILAR D, GOELLNER E M, ALMEIDA K H, et al. Base excision repair and lesion-dependent subpathways for repair of oxidative DNA damage [J]. Antioxidants and Redox Signaling, 2011, 14(12): 2491-2507.
[9] [9] IYAMA T, WILSON D M. DNA repair mechanisms in dividing and non-dividing cells [J]. DNA Repair (Amst), 2013, 12(8): 620-636.
[10] [10] MINATO Y, GOHL D M, THIEDE J M, et al. Genomewide assessment of Mycobacterium tuberculosis conditionally essential metabolic pathways [J]. mSystems, 2019, 4(4): e00070-19.
[11] [11] DROHAT A C, KWON K, KROSKY D J, et al. 3-Methyladenine DNA glycosylase I is an unexpected helix-hairpin-helix superfamily member [J]. Nature Structural Biology, 2002, 9(9): 659-664.
[12] [12] MOK Y G, UZAWA R, LEE J, et al. Domain structure of the DEMETER 5-methylcytosine DNA glycosylase [J]. Proceedings of the National Academy of Sciences of the United States of America, 2010, 107(45): 19225-19230.
[13] [13] YANG M, AAMODT R M, DALHUS B, et al. The ada operon of Mycobacterium tuberculosis encodes two DNA methyltransferases for inducible repair of DNA alkylation damage [J]. DNA Repair (Amst), 2011, 10(6): 595-602.
[14] [14] BROOKS S C, ADHIKARY S, RUBINSON E H, et al. Recent advances in the structural mechanisms of DNA glycosylases [J]. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2013, 1834(1): 247-271.
[15] [15] FRIEDMAN J I, STIVERS J T. Detection of damaged DNA bases by DNA glycosylase enzymes [J]. Biochemistry, 2010, 49(24): 4957-4967.
[16] [16] SINGH A. Guardians of the mycobacterial genome: a review on DNA repair systems in Mycobacterium tuberculosis [J]. Microbiology (Reading), 2017, 163(12): 1740-1758.
[17] [17] KUANG S, ZHENG J, YANG H, et al. Structure insight of GSDMD reveals the basis of GSDMD autoinhibition in cell pyroptosis [J]. Proceedings of the National Academy of Sciences of the United States of America, 2017, 114(40): 10642-10647.
[18] [18] LI Z, WU D, ZHAN B, et al. Structural insights into the complex of trigger factor chaperone and ribosomal protein S7 from Mycobacterium tuberculosis [J]. Biochemical and Biophysical Research Communications, 2019, 512(4): 838-844.
[19] [19] MACNEIL A, GLAZIOU P, SISMANIDIS C, et al. Global epidemiology of tuberculosis and progress toward meeting global targets-worldwide, 2018 [J]. MMWR: Morbidity and Mortality Weekly Report, 2020, 69(11): 281-285.
[20] [20] BOITEUX S, GUILLET M. Abasic sites in DNA: repair and biological consequences in Saccharomyces cerevisiae[J]. DNA Repair (Amst), 2004, 3(1): 1-12.
[21] [21] DALEY J M, ZAKARIA C, RAMOTAR D. The endonuclease IV family of apurinic/apyrimidinic endonucleases [J]. Mutation Research, 2010, 705(3): 217-227.
[22] [22] KLING A, LUKAT P, ALMEIDA D V, et al. Targeting DnaN for tuberculosis therapy using novel griselimycins [J]. Science, 2015, 348(6239): 1106-1112.
[23] [23] CAO C, KWON K, JIANG Y L, et al. Solution structure and base perturbation studies reveal a novel mode of alkylated base recognition by 3-methyladenine DNA glycosylase I [J]. Journal of Biological Chemistry, 2003, 278(48): 48012-48020.
Get Citation
Copy Citation Text
LIU Zuolong, QI Qi, ZHAN Bowen, GENG Lu, LI Jixi. Expression, Purification and Crystallographic Study of DNA Glycosylase TagA of Mycobacterium tuberculosis[J]. Acta Laser Biology Sinica, 2021, 30(4): 325
Category:
Received: Apr. 14, 2021
Accepted: --
Published Online: Sep. 12, 2021
The Author Email: Jixi LI (lijixi@fudan.edu.cn)