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Advanced Photonics Nexus, Volume. 3, Issue 1, 016001(2024)

High-speed autopolarization synchronization modulation three-dimensional structured illumination microscopy Article Video

Yaning Li1,2、†, Ruijie Cao1,2, Wei Ren1,2, Yunzhe Fu1,2, Yiwei Hou1,2, Suyi Zhong1,2, Karl Zhanghao1,2, Meiqi Li1,2、*, and Peng Xi1,2、*
Author Affiliations
  • 1Peking University, College of Future Technology, Department of Biomedical Engineering, Beijing, China
  • 2Peking University, National Biomedical Imaging Center, Beijing, China
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    [1] M. Sauer, M. Heilemann. Single-molecule localization microscopy in eukaryotes. Chem. Rev., 117, 7478-7509(2017).

    [2] S. J. Sahl, S. W. Hell, S. Jakobs. Fluorescence nanoscopy in cell biology. Nat. Rev. Mol. Cell Biol., 18, 685-701(2017).

    [3] E. H. Rego et al. Nonlinear structured-illumination microscopy with a photoswitchable protein reveals cellular structures at 50-nm resolution. Proc. Natl. Acad. Sci. U. S. A., 109, E135-E143(2012).

    [4] L. Schermelleh et al. Super-resolution microscopy demystified. Nat. Cell Biol., 21, 72-84(2019).

    [5] M. G. L. Gustafsson. Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy. J. Microsc., 198, 82-87(2000).

    [6] Y. Guo et al. Visualizing intracellular organelle and cytoskeletal interactions at nanoscale resolution on millisecond timescales. Cell, 175, 1430-1442.e17(2018).

    [7] X. Huang et al. Fast, long-term, super-resolution imaging with Hessian structured illumination microscopy. Nat. Biotechnol., 36, 451-459(2018).

    [8] P. Kner et al. Super-resolution video microscopy of live cells by structured illumination. Nat. Methods, 6, 339-342(2009).

    [9] M. G. L. Gustafsson et al. Three-dimensional resolution doubling in wide-field fluorescence microscopy by structured illumination. Biophys. J., 94, 4957-4970(2008).

    [10] R. Fiolka et al. Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination. Proc. Natl. Acad. Sci. U. S. A., 109, 5311-5315(2012).

    [11] F. Kraus et al. Quantitative 3D structured illumination microscopy of nuclear structures. Nat. Protoc., 12, 1011-1028(2017).

    [12] A. Lal, C. Shan, P. Xi. Structured illumination microscopy image reconstruction algorithm. IEEE J. Sel. Top. Quantum Electron., 22, 50-63(2016).

    [13] M. Müller et al. Open-source image reconstruction of super-resolution structured illumination microscopy data in ImageJ. Nat. Commun., 7, 10980(2016).

    [14] J. Lyu et al. Motion-resistant structured illumination microscopy based on principal component analysis. Opt. Lett., 48, 175-178(2023).

    [15] G. Wen et al. Spectrum-optimized direct image reconstruction of super-resolution structured illumination microscopy. PhotoniX, 4, 19(2023).

    [16] W. Zhaojun et al. High-speed image reconstruction for optically sectioned, super-resolution structured illumination microscopy. Adv. Photonics, 4, 026003(2022).

    [17] X. Chen et al. Superresolution structured illumination microscopy reconstruction algorithms: a review. Light Sci. Appl., 12, 172(2023).

    [18] S. Jiang et al. Frequency-domain diagonal extension imaging. Adv. Photonics, 2, 036005(2020).

    [19] M. A. A. Neil, R. Juskaitis, T. Wilson. Real time 3D fluorescence microscopy by two beam interference illumination. Opt. Commun., 153, 1-4(1998).

    [20] M. G. L. Gustafsson, D. A. Agard, J. W. Sedat. Doubling the lateral resolution of wide-field fluorescence microscopy using structured illumination. Proc. SPIE, 3919, 141-150(2000).

    [21] C. He et al. Polarisation optics for biomedical and clinical applications: a review. Light Sci. Appl., 10, 194(2021).

    [22] C. S. Smith et al. Structured illumination microscopy with noise-controlled image reconstructions. Nat. Methods, 18, 821-828(2021).

    [23] G. Wen et al. High-fidelity structured illumination microscopy by point-spread-function engineering. Light-Sci. Appl., 10, 70(2021).

    [24] R. Cao et al. Open-3DSIM: an open-source three-dimensional structured illumination microscopy reconstruction platform. Nat. Methods, 20, 1183-1186(2023).

    [25] A. Descloux, K. S. Grußmayer, A. Radenovic. Parameter-free image resolution estimation based on decorrelation analysis. Nat. Methods, 16, 918-924(2019).

    [26] P. Theer, C. Mongis, M. Knop. PSFj: know your fluorescence microscope. Nat. Methods, 11, 981-982(2014).

    [27] K. Zhanghao et al. Super-resolution imaging of fluorescent dipoles via polarized structured illumination microscopy. Nat. Commun., 10, 4694(2019).

    [28] K. Zhanghao et al. High-dimensional super-resolution imaging reveals heterogeneity and dynamics of subcellular lipid membranes. Nat. Commun., 11, 5890(2020).

    [29] M. Guan et al. Polarization modulation with optical lock-in detection reveals universal fluorescence anisotropy of subcellular structures in live cells. Light Sci. Appl., 11, 4(2022).

    [30] Y. W. Zhang et al. Super-resolution algorithm based on Richardson-Lucy deconvolution for three-dimensional structured illumination microscopy. J. Opt. Soc. Am. A, 36, 173-178(2019).

    [31] W. Zhao et al. Sparse deconvolution improves the resolution of live-cell super-resolution fluorescence microscopy. Nat. Biotechnol., 40, 606-617(2022).

    [32] A. A. Akatay et al. Endocytosis at extremes: formation and internalization of giant clathrin-coated pits under elevated membrane tension. Front. Mol. Biosci., 9, 959737(2022).

    [33] M. Mund et al. Clathrin coats partially preassemble and subsequently bend during endocytosis. J. Cell Biol., 222, e202206038(2023).

    [34] H. Yiwei et al. Noise-robust, physical microscopic deconvolution algorithm enabled by multi-resolution analysis regularization(2023).

    [35] M. Li et al. Structured illumination microscopy using digital micro-mirror device and coherent light source. Appl. Phys. Lett., 116, 233702(2020).

    [36] H. Ikoma et al. A convex 3D deconvolution algorithm for low photon count fluorescence imaging. Sci. Rep., 8, 11489(2018).

    [37] Y. Zhang et al. Computational optical sectioning with an incoherent multiscale scattering model for light-field microscopy. Nat. Commun., 12, 6391(2021).

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    Yaning Li, Ruijie Cao, Wei Ren, Yunzhe Fu, Yiwei Hou, Suyi Zhong, Karl Zhanghao, Meiqi Li, Peng Xi, "High-speed autopolarization synchronization modulation three-dimensional structured illumination microscopy," Adv. Photon. Nexus 3, 016001 (2024)

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    Paper Information

    Category: Research Articles

    Received: Sep. 16, 2023

    Accepted: Nov. 21, 2023

    Published Online: Dec. 25, 2023

    The Author Email: Li Meiqi (limeiqi@pku.edu.cn), Xi Peng (xipeng@pku.edu.cn)

    DOI:10.1117/1.APN.3.1.016001

    CSTR:32397.14.1.APN.3.1.016001

    Topics

    laser devices and laser physics
    Lasers and Laser Optics
    Laser physics
    laser manufacturing
    Instrumentation, Measurement and Metrology