[1] Dynamic imaging of collagen and its modulation in tumors in vivo using second-harmonic generation. Nat Med., 9, 796-800(2003).

[2] Dynamics and mechanics of the microtubule plus end. Nature., 422, 753-758(2003).

[3] A three-dimensional human neural cell culture model of Alzheimer’s disease. Nature., 515, 274-U293(2014).

[4] A tense situation: Forcing tumour progression. Nat. Rev. Cancer., 9, 108-122(2009).

[5] Second harmonic generation imaging Microscopy: Applications to diseases diagnostics. Anal. Chem., 83, 3224-3231(2011).

[6] Simple and efficient delivery of cell-impermeable organic fluorescent probes into live cells for live-cell superresolution imaging. Light-Sci. Appl., 8(2019).

[7] Nature designs tough collagen: Explaining the nanostructure of collagen fibrils. Proc. Natl. Acad. Sci. U. S. A., 103, 12285-90(2006).

[8] Active diffusion and microtubule-based transport oppose myosin forces to position organelles in cells. Nat. Commun., 7(2016).

[9] Microtubule disruption changes endothelial cell mechanics and adhesion. Sci. Rep-Uk., 9(2019).

[10] Mechanism of signal transmission in nerve axons. Annu. Rev. Biophys. Bio., 1, 347-368(1972).

[11] Mimicking embedded vasculature structure for 3D cancer on a chip approaches through micromilling (vol 7, 16724, 2017). Sci. Rep-Uk., 9(2019).

[12] Cell-surface interactions with extracellular materials. Annu. Rev. Biochem., 52, 761-799(1983).

[13] Structure and biological activity of the extracellular matrix. J. Mol. Med.-Jmm., 76, 253-265(1998).

[14] Optical metrics of the extracellular matrix predict compositional and mechanical changes after myocardial infarction. Sci. Rep.-Uk., 6(2016).

[15] Collagen reorganization at the tumor-stromal interface facilitates local invasion. Bmc Med., 4(2006).

[16] Second harmonic generation microscopy: Principles and applications to disease diagnosis. Laser Photonics Rev., 5, 13-26(2011).

[17] Determination of collagen fiber orientation in histological slides using Mueller microscopy and validation by second harmonic generation imaging. Opt. Express., 22, 22561-22574(2014).

[18] Quantification of the temporal evolution of collagen orientation in mechanically conditioned engineered cardiovascular tissues. Ann. Biomed. Eng., 37, 1263-1272(2009).

[19] Analysis of orientations of collagen fibers by novel fiber-tracking software. Microsc. Microanal., 9, 574-580(2003).

[20] Second-harmonic imaging microscopy for visualizing biomolecular arrays in cells, tissues and organisms. Nat. Biotechnol., 21, 1356-1360(2003).

[21] Nonlinear magic: Multiphoton microscopy in the biosciences. Nat. Biotechnol., 21, 1368-1376(2003).

[22] Quantitative analysis of collagen fiber organization in injured tendons using Fourier transform-second harmonic generation imaging. Opt. Express., 18, 24983-24993(2010).

[23] Quantitative second-harmonic generation microscopy for imaging porcine cortical bone: Comparison to SEM and its potential to investigate age-related changes. Bone., 50, 643-650(2012).

[24] In-situ characterization of the uncrimping process of arterial collagen fibers using two-photon confocal microscopy and digital image correlation. J. Biomech., 46, 2726-2729(2013).

[25] Three-dimensional distribution of transverse collagen fibers in the anterior human corneal stroma. Invest. Ophth. Vis. Sci., 54, 7293-7301(2013).

[26] Automated quantification of three-dimensional organization of fiber-like structures in biological tissues. Biomaterials., 116, 34-47(2017).

[27] Identification of endoplasmic reticulum formation mechanism by multi-parametric, quantitative super-resolution imaging. Opt. Lett., 47, 357-360(2022).

[28] Mapping organizational changes of fiber-like structures in disease progression by multiparametric, quantitative imaging. Laser Photonics Rev., 16(2022).

[29] Collagen fiber orientation at the tendon to bone insertion and its influence on stress concentrations. J. Biomech., 39, 1842-1851(2006).

[30] Collagen organization in canine myxomatous mitral valve disease: An X-ray diffraction study. Biophys. J., 93, 2472-2476(2007).

[31] Planar biaxial behavior of fibrin-based tissue-engineered heart valve leaflets. Tissue Eng. Pt. A., 15, 2763-2772(2009).

[32] Fully automated, quantitative, noninvasive assessment of collagen fiber content and organization in thick collagen gels. J. Appl. Phys., 105(2009).

[33] An automated image processing method to quantify collagen fibre organization within cutaneous scar tissue. Exp. Dermatol., 24, 78-80(2015).

[34] Quantitative evaluation of both histological and mechanical recovery in injured tendons using fourier-transform second-harmonic-generation microscopy. Ieee J. Sel. Top. Quant., 27(2021).

[35] Probing multiscale collagenous tissue by nonlinear microscopy. Acs Biomater. Sci. Eng., 3, 2825-2831(2017).

[36] Application of the optical fourier-transform for analysis of the spatial-distribution of collagen-fibers in normal and osteopetrotic bone tissue. Histochemistry., 74, 123-137(1982).

[37] Quantitative analysis of forward and backward second-harmonic images of collagen fibers using Fourier transform second-harmonic-generation microscopy. Opt. Lett., 34, 3779-3781(2009).

[38] Estimation of muscle fiber orientation in ultrasound images using revoting Hough transform (RVHT). Ultrasound. Med. Biol., 34, 1474-1481(2008).

[39] Measurement of orientation and distribution of cellular alignment and cytoskeletal organization. Ann. Biomed. Eng., 27, 712-720(1999).

[40] Quantification of collagen orientation in 3D engineered tissue. Ifmbe Proc., 15, 282–+(2007).

[41] 3D organizational mapping of collagen fibers elucidates matrix remodeling in a hormone-sensitive 3D breast tissue model. Biomaterials., 179, 96-108(2018).

[42] A computational model for understanding the micro-mechanics of collagen fiber network in the tunica adventitia. Biomechanics and Modeling in Mechanobiology., 18, 1507-1528(2019).

[43] Fourier transform-second-harmonic generation imaging of biological tissues. Opt. Express., 17, 14534-14542(2009).

[44] Rapid quantification of pixel-wise fiber orientation data in micrographs. J. Biomed. Opt., 18(2013).

[45] Rapid three-dimensional quantification of voxel-wise collagen fiber orientation. Biomed. Opt. Express., 6, 2294-310(2015).

[46] Principles of diffusion tensor imaging and its applications to basic neuroscience research. Neuron., 51, 527-539(2006).

[47] Tracking neuronal fiber pathways in the living human brain. P. Natl. Acad. Sci. USA., 96, 10422-10427(1999).

[48] Mr diffusion tensor spectroscopy and imaging. Biophys. J., 66, 259-267(1994).

[49] A novel approach to the human connectome: Ultra-high resolution mapping of fiber tracts in the brain. Neuroimage., 54, 1091-1101(2011).

[50] Computational segmentation of collagen fibers from second-harmonic generation images of breast cancer. J. Biomed. Opt., 19(2014).

[51] An algorithm for extracting the network geometry of three-dimensional collagen gels. J. Microsc.-Oxford., 232, 463-475(2008).

[52] Cellular alignment and fusion: Quantifying the effect of macrophages and fibroblasts on myoblast terminal differentiation. Exp. Cell. Res., 370, 542-550(2018).

[53] Automated and adaptable quantification of cellular alignment from microscopic images for tissue engineering applications. Tissue. Eng. Part C Methods., 17, 641-9(2011).

[54] Quantifying collagen structure in breast biopsies using second-harmonic generation imaging. Biomedical Optics Express., 3, 2021-2035(2012).

[55] Application of Fourier transform-second-harmonic generation imaging to the rat cervix. J. Microsc., 251, 77-83(2013).

[56] Quantification of collagen fiber organization using three-dimensional Fourier transform-second-harmonic generation imaging. Opt. Express., 20, 21821-21832(2012).

[57] Collagen cross-linking: Insights on the evolution of metazoan extracellular matrix. Sci. Rep.-Uk., 6(2016).

[58] Lysyl oxidase enzymes mediate TGF-beta1-induced fibrotic phenotypes in human skin-like tissues. Lab. Invest., 99, 514-527(2019).

[59] Impact of collagen crosslinking on the second harmonic generation signal and the fluorescence lifetime of collagen autofluorescence. Skin Res. Technol., 18, 168-179(2012).

[60] Lysyl oxidase-mediated collagen crosslinks may be assessed as markers of functional properties of tendon tissue formation. Acta. Biomater., 10, 1370-1379(2014).

[61] Experimental investigation of collagen waviness and orientation in the arterial adventitia using confocal laser scanning microscopy. Biomechanics and Modeling in Mechanobiology., 11, 461-473(2012).

[62] Contribution of collagen fiber undulation to regional biomechanical properties along porcine thoracic aorta. J. Biomech. Eng.-T Asme., 137(2015).

[63] Development of an FEA framework for analysis of subject-specific aortic compliance based on 4D flow MRI. Acta Biomater., 125, 154-171(2021).

[64] Regional structural and biomechanical alterations of the ovine main pulmonary artery during postnatal growth. J. Biomech. Eng.-T Asme., 135(2013).

[65] Modeling elastic lamina buckling in the unloaded aortic media. Mech. Eng. J., 8(2021).

[66] Collagen fibril abnormalities in human and mice abdominal aortic aneurysm. Acta. Biomater., 110, 129-140(2020).

[67] Quantitative evaluation of the human vocal fold extracellular matrix using multiphoton microscopy and optical coherence tomography. Sci. Rep.-Uk., 11(2021).

[68] Detection and characterization of waviness in unidirectional Gfrp using rayleigh wave air coupled ultrasonic testing (Rac-Ut). Res. Nondestruct. Eval., 24, 191-201(2013).

[69] Arterial extracellular matrix: A mechanobiological study of the contributions and interactions of elastin and collagen. Biophys. J., 106, 2684-2692(2014).

[70] Passive mechanics and connective-tissue composition of canine arteries. Am. J. Physiol., 234, H533-H541(1978).

[71] Biaxial deformation of collagen and elastin fibers in coronary adventitia. J. Appl. Physiol., 115, 1683-1693(2013).

[72] Initial stages of tumor cell-induced angiogenesis: Evaluation via skin window chambers in rodent models. J. Natl. Cancer Inst., 92, 143-7(2000).

[73] From angiogenesis to neuropathology. Nature., 438, 954-9(2005).

[74] Obesity, blood pressure, and retinal vessels: A meta-analysis. Pediatrics., 141(2018).

[75] High-resolution wide-field imaging of retinal and choroidal blood perfusion with optical microangiography. J. Biomed. Opt., 15, 026011(2010).

[76] Impact of tapering of arterial vessels on blood pressure, pulse wave velocity, and wave intensity analysis using one-dimensional computational model. Int. J. Numer Method Biomed. Eng., 37, e3312(2021).

[77] Obesity, high blood pressure, and physical activity determine vascular phenotype in young children. Hypertension., 73, 153-161(2019).

[78] Association of body composition and blood pressure categories with retinal vessel diameters in primary school children. Hypertens. Res., 39, 423-9(2016).

[79] Influence of blood pressure and body mass index on retinal vascular caliber in preschool-aged children. J. Hum. Hypertens., 27, 523-8(2013).

[80] Blood pressure and retinal arteriolar narrowing in children. Hypertension., 49, 1156-62(2007).

[81] Full three-dimensional segmentation and quantification of tumor vessels for photoacoustic images. Photoacoustics., 20, 100212(2020).

[82] Automated vessel diameter quantification and vessel tracing for OCT angiography. J. Biophotonics., 13, e202000248(2020).

[83] Mapping physiological and pathological functions of cortical vasculature through aggregation-induced emission nanoprobes assisted quantitative, in vivo NIR-II imaging. Biomater Adv., 136(2022).

[84] Microscopic image analysis by the optical Fourier transform. Mater. Med. Pol., 12, 272-85(1980).

[85] Quantitative morphology of collagen fibers in cutaneous malignant melanoma and melanocytic nevus. Am. J. Dermatopathol., 18, 358-63(1996).

[86] Association of the collagen signature in the tumor microenvironment with lymph node metastasis in early gastric cancer. Jama. Surg., 154(2019).

[87] Collagen organization of renal cell carcinoma differs between low and high grade tumors. Bmc Cancer., 19(2019).

[88] Collagen density promotes mammary tumor initiation and progression. Bmc Med., 6, 11(2008).

[89] Large-scale tumor-associated collagen signatures identify high-risk breast cancer patients. Theranostics., 11, 3229-3243(2021).