Acta Physica Sinica, Volume. 69, Issue 12, 128701-1(2020)

Fast structured illumination three-dimensional color microscopic imaging method based on Hilbert-transform

Jia Qian1,2, Shi-Pei Dang1,2, Xing Zhou1, Dan Dan1, Zhao-Jun Wang3, Tian-Yu Zhao1,2, Yan-Sheng Liang3, Bao-Li Yao1,2、*, and Ming Lei2,3、*
Author Affiliations
  • 1State Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an 710119, China
  • 2School of Optoelectronics, University of Chinese Academy of Sciences, Beijing 100049, China
  • 3School of Science, Xi’an Jiaotong University, Xi’an 710049, China
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    Figures & Tables(8)
    Flowchart diagram comparison between HT-COS algorithm and HSV-RMS algorithm: (a) HT-COS algorithm; (b) HSV-RMS algorithm.
    Effect of phase-shift error on optical sectioning images: (a) Wide-field image with defocused background; (b) structured illumination image; (c)−(f) three-dimensional (3D) color optical sectioning images processed by HSV-RMS algorithm under different phase-shift errors; (g)−(j) 3D color optical sectioning images processed by HT-COS algorithm under different phase-shift errors.
    Influence of Gaussian noise on the reconstructed optical sectioning images. Structured illumination image, optical sectioning images calculated by the HSV-RMS algorithm and HT-COS algorithm, respectively, under the conditions of the Gaussian noise with variances of (a)−(c) 0.01, (d)−(f) 0.03, and (g)−(i) 0.05.
    Comparison of color restoration fidelity between HSV-RMS algorithm and HT-COS algorithm: (a)−(c) Raw image, optical sectioning image calculated by HSV-RMS algorithm and optical sectioning image calculated by HT-COS algorithm, respectively; (d)−(f) RGB values for the four different regions of each image.
    Schematic diagram of structured illumination color optical sectioning system: (a) Light-path diagram; (b) apparatus diagram
    Comparison of reconstructed result of pollen grain between HSV-RMS algorithm and HT-COS algorithm: (a) 3D reconstructed color image from HSV-RMS algorithm; (b) 3D reconstructed color image from HT-COS algorithm; (c) the enlarged image in the purple rectangular box in panel (a); (d) the enlarged image in the green rectangular box in (b); (e) normalized intensity distribution of the line-scan in panel (c) and (d), i.e. the “root-shaped” structure. Scale bar: 30 μm
    3D color imaging result of a Chinese tiger beetle: (a) Maximum intensity projection image of the tiger beetle under 4 ×, NA = 0.2 objective lens, the 3D volume is rendered from 84 data sets stitching and sliced 350 layers; (b) schematic diagram of 3D reconstruction in axial direction after imaging processing with HSV-RMS algorithm; (c) maximum intensity projection images of the area pointed by the red arrow in panel (a) processed with HSV-RMS algorithm. The images are captured under 20 ×, NA = 0.45 objective lens; (d) 3D height map of panel (c); (e) schematic diagram of 3D reconstruction in axial direction after imaging processing with HT-COS algorithm; (f) maximum intensity projection images of the area pointed by the red arrow in (a) processed with HT-COS algorithm. The images are captured under 20 ×, NA = 0.45 objective lens; (g) the 3D height map of panel (f).
    • Table 1.

      Performance comparison of two algorithms for color optical sectioning SIM.

      两种SIM彩色光切片算法的性能比较

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      Table 1.

      Performance comparison of two algorithms for color optical sectioning SIM.

      两种SIM彩色光切片算法的性能比较

      视场个数图像采集总时间/s图像处理总时间/s图像数据容量/GB三维数据总像素数/pixels
      HSV-RMS算法8417671360810001010
      HT-COS算法84147297446701010
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    Jia Qian, Shi-Pei Dang, Xing Zhou, Dan Dan, Zhao-Jun Wang, Tian-Yu Zhao, Yan-Sheng Liang, Bao-Li Yao, Ming Lei. Fast structured illumination three-dimensional color microscopic imaging method based on Hilbert-transform[J]. Acta Physica Sinica, 2020, 69(12): 128701-1

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    Paper Information

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    Received: Mar. 9, 2020

    Accepted: --

    Published Online: Dec. 8, 2020

    The Author Email: Ming Lei (ming.lei@mail.xjtu.edu.cn)

    DOI:10.7498/aps.69.20200352

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