Acta Laser Biology Sinica, Volume. 28, Issue 4, 360(2019)

Sequencing and Analysis of Transcriptome of Paeonia jishanensis

HUANG Chunguo1, WANG Binghua2, HU Taohua3, HAN Xiaoli4,5, LI Wenguang1, LI Ping1, and HAO Xingyu1、*
Author Affiliations
  • 1[in Chinese]
  • 2[in Chinese]
  • 3[in Chinese]
  • 4[in Chinese]
  • 5[in Chinese]
  • show less
    References(26)

    [1] [1] HONG Deyuan, ZHOU Shiliang, HE Xinjin, et al. Current status of wild tree peony species with special reference to conservation[J], Biodiversity Science, 2017, 25(7): 781-793.

    [2] [2] ZHANG Feng. The endangered cause of Paeonia suffruticosa var.spontanea, an endemic to china[J]. Acta Ecologica Sinica. 2003, 23(7): 1436-1441.

    [3] [3] GAO Yahui, ZHANG Shaowen, ZHANG Shuxia, et al. Research progress on composition and application of peony[J]. Journal of Henan University of Technology (Natural Science Edition), 2011, 32(6): 93-96.

    [4] [4] YUAN Yaguang, WANG Chengzhong, RAO Hongyan. Advances in the study of flavonoids in peony flowers[J]. Journal of Shandong Polytechnic University, 2013, 27(4): 31-34.

    [5] [5] ZHOU Lin, WANG Yan, LV Chunyan, et al. Identification of components of flower pigments in petals of Paeonia lutea wild population in Yunnan[J]. Journal of Northeast Forestry University, 2011, 39(8): 52-54.

    [6] [6] WANG Lin, ZHANG Jintun. The niche characteristics of endangered plant Paeonia suffruticosa var.spontanea[J]. Chinese Journal of Ecology, 2001, 20(4): 65-69.

    [7] [7] ZHAO Yipeng, CAI Zuguo, LI Benyong. Research advance of Paeonia suffruticosa var.sponanea[J]. Journal of Henan Agricultural Sciences, 2009, 26(7): 14-17

    [8] [8] LIN Qibing, ZHOU Zhiqin, ZHAO Xuan, et al. Interspecific relationships among the wild species of Paeonia Sect.Moutan DC.based on DNA sequences of Adh gene family[J]. Acta Horticulturae Sinica, 2004, 34(5): 627-632.

    [9] [9] ZHOU S L, ZOU X H, ZHOU Z Q, et al. Multiple species of wild tree peonies gave rise to the ‘king of flowers’, Paeonia suffruticosa Andrews[J]. Proceedings Biological Sciences, 2014, 281(1797): 20141687

    [10] [10] YUE Guidong, GAO Qiang, LUO Longhai, et al. The application of high-throughput sequencing technology in plant and animal research[J]. Scientia Sinica Vitae, 2012, 42(2):107-124.

    [11] [11] DE L B M, MCCOMBIE W R. Assembling genomic DNA sequences with PHRAP[J]. Current Protocol Bioinformatics, 2007, 3(11): 102-111.

    [12] [12] PERTEA G, HUANG X, LIANG F, et al. TIGR gene Indices clustering tools (TGICL):a software system for fast clustering of large EST datasets[J]. Bioinformatics, 2003, 19(5): 651-652.

    [13] [13] LOBO I. Basic local alignment search tool (BLAST)[J]. Journal of Molecular Biology, 2012, 215(3): 403-410.

    [14] [14] ASHBURNER M, BALL C A, BLAKE J A, et al. Gene ontology:tool for the unification of biology[J]. Nature Genetics, 2000, 25(1): 25-29

    [15] [15] KANEHISA M, GOTO S, KAWASHIMA S, et al. The KEGG resource for deciphering the genome[J]. Nucleic Acids Research, 2004, 32(90001): D277-D280.

    [16] [16] POWELL S, FORSLUND K, SZKLARCZYK D, et al. eggNOG v4.0:nested orthology inference across 3686 organisms[J]. Nucleic Acids Research, 2014, 42: D231-D239.

    [17] [17] QI Xiangying, CHEN Zongli, XUE Hao, et al. Study on callus induction of dwarf peony leaves[J]. Jiangsu Agricultural Sciences, 2012, 40(1): 48-49.

    [18] [18] JIA Wenqing, ZHANG Shaowei, LIU Luying, et al. Effects of different media and storage methods on Pollen Germination of Paeonia suffruticosa var. spontanea[J]. Southwest China Journal of Agricultural Sciences, 2013, 26(1): 338-341.

    [19] [19] YAO Lianfang, LIU Huichao, DU Xiaohua. Investigation on survival status of endangered species of dwarf peony in Taihang mountain area of Jiyuan[J]. Northern Horticulture, 2010, (1): 139-141.

    [20] [20] ZHANG Xiaoxiao, ZHANG Yanlong, NIU Lixin. Revision of Paeonia and its geographical distribution in qinling mountains[J]. Acta Botanica Boreali-Occidentalia Sinica, 2016, 36(5): 1046-1054.

    [21] [21] ZHANG Shaoping, HONG Jianji, QIU Shanlian, et al. Sequencing and analysis of the transcriptone of Gynura bicolor[J]. Acta Horticulturae Sinica, 2016, 43(5): 935-946.

    [22] [22] SCHAFLEITNER R, KUMAR S, LIN C Y, et al. The okra (Abelmoschus esculentus) transcriptome as a source for gene sequence information and molecular markers for diversity analysis[J]. Gene, 2013, 517(1): 27-36.

    [23] [23] ZHANG Shizhong, FU Ying, ZHOU Bo, et al. The construction and instruction manual of apple functional genomic database[J]. Acta Horticulturae Sinica, 2012, 39(11): 2245-2250.

    [24] [24] NIE Jiahui, ZHANG Fusheng, TIAN Dong, et al. Comparative transcriptomic analysis of leaves of leaves of Tussilago farfara in different development stages[J]. Chineses Traditional and Herbal Drugs, 2018, 49(13): 3095-3101.

    [25] [25] XIE Dongmei, YU Nianjun, HUANG Luqi, et al. Next generation sequencing and transcriptome analysis of root bark from Paeonia suffruticosa cv. Feng Dan[J]. China Journal of Chinese Materia Medica, 2017, 42(15): 1954-2961.

    [26] [26] LIN Yihua, WU Xiaobin, ZHENG Tao, Functional annotation and analysis of transcriptome in different flower color of melastoma malabathricum[J]. Molecular Plant Breeding, 2017, 15(06): 109-114.

    Tools

    Get Citation

    Copy Citation Text

    HUANG Chunguo, WANG Binghua, HU Taohua, HAN Xiaoli, LI Wenguang, LI Ping, HAO Xingyu. Sequencing and Analysis of Transcriptome of Paeonia jishanensis[J]. Acta Laser Biology Sinica, 2019, 28(4): 360

    Download Citation

    EndNote(RIS)BibTexPlain Text
    Save article for my favorites
    Paper Information

    Category:

    Received: Mar. 4, 2019

    Accepted: --

    Published Online: Sep. 27, 2019

    The Author Email: Xingyu HAO (haoxingyu1976@126.com)

    DOI:10.3969/j.issn.1007-7146.2019.04.010

    Topics