Journal of Northwest Forestry University, Volume. 40, Issue 4, 117(2025)

Genome-wide Analysis of Aux/IAA Gene Family and Their Expression Profiles in Zanthoxylum bungeanum

WU Mengjia, CHEN Lei, LI Botong, and LIU Yonghong*
Author Affiliations
  • (College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
  • show less

    Aux IAA gene family plays an essential regulatory role in the auxin signal transduction pathway and plant development In this study 51 Aux IAA genes were identified from the genome of Zanthoxylum bungeanum Zb Phylogenetic tree analysis conserved motif composition and gene structure analyses revealed that the ZbIAA genes were classified into seven subfamilies Members within the same subfamily shared a similar gene structure Furthermore 34 genes 67% exhibiting tandem repeats and segmental duplications The promoter sequences of ZbIAA genes contained numerous cis-acting elements related to plant hormones and growth development Expression profiles of ZbIAA genes during different developmental stages of Sichuan pepper thorns revealed that ZbIAA1 ZbIAA5 ZbIAA25 ZbIAA30 and ZbIAA44 had significantly higher expression levels than other members They may play an important role in the development of Sichuan pepper thorns Codon usage bias analysis showed a preference for A T-ending codons within the ZbIAA gene family with 25 preferred codons and two unbiased ones This research lays a theoretical foundation for further functional analysis of the ZbIAA gene family

    Tools

    Get Citation

    Copy Citation Text

    WU Mengjia, CHEN Lei, LI Botong, LIU Yonghong. Genome-wide Analysis of Aux/IAA Gene Family and Their Expression Profiles in Zanthoxylum bungeanum[J]. Journal of Northwest Forestry University, 2025, 40(4): 117

    Download Citation

    EndNote(RIS)BibTexPlain Text
    Save article for my favorites
    Paper Information

    Received: May. 31, 2024

    Accepted: Sep. 12, 2025

    Published Online: Sep. 12, 2025

    The Author Email: LIU Yonghong (lyhlxy2006@163.com)

    DOI:10.3969/j.issn.1001-7461.2025.04.13

    Topics