Laser & Optoelectronics Progress, Volume. 59, Issue 2, 0210002(2022)

Fast Segmentation Method of Cell Image Based on Dual-Gaussian Filtering

Jingcheng Wu1, Lulu Shi2, Yanan Du1, Luhong Wen1, and Zhenzhi Shi1、*
Author Affiliations
  • 1The Research Institute of Advanced Technologies, Ningbo University, Ningbo , Zhejiang 315211, China
  • 2China Innovation Instrument Co., Ltd., Ningbo , Zhejiang 315100, China
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    Figures & Tables(13)
    Feature analysis of phase contrast microscopy image. (a) Cell image; (b) gray value distribution at longitudinal lines; (c) gray value distribution at transverse line
    Flow chart of the proposed method
    Dual-Gaussian filtering process. (a) Input image; (b) Gaussian filtering (large kernel); (c) Gaussian filtering (small kernel); (d) difference calculation
    Effect of different σ2 values ​​on the segmentation results
    Relationship between σ2 value and standard deviation of fdg
    Comparison diagrams before and after dual-Gaussian filtering. (a) Before processing; (b) grayscale mapping before processing; (c) after processing; (d) grayscale mapping after processing
    Binary segmentation image. (a) Threshold segmentation; (b) hole filling; (c) area constraint
    Segmentation results of low-density cell images processed by different algorithms. (a) Cell image; (b) 2D-Otsu algorithm; (c) Jaccard algorithm; (d) Flight algorithm; (e) Vicar algorithm; (f) proposed algorithm
    Segmentation results of medium-density cell images processed by different algorithms. (a) Cell image; (b) 2D-Otsu algorithm; (c) Jaccard algorithm; (d) Flight algorithm; (e) Vicar algorithm; (f) proposed algorithm
    Segmentation results of high-density cell images processed by different algorithms. (a) Cell image; (b) 2D-Otsu algorithm; (c) Jaccard algorithm; (d) Flight algorithm; (e) Vicar algorithm; (f) proposed algorithm
    Comparison of segmentation results of different algorithms in complex situations
    • Table 1. Comparison of segmentation results using different algorithms

      View table

      Table 1. Comparison of segmentation results using different algorithms

      AlgorithmPrecisionRecallF-scoreTime /s
      2D-Otsu0.08830.04620.06070.98
      Jaccard0.90300.84700.86062.66
      Flight0.91660.94020.92812.47
      Vicar0.97560.82460.89190.78
      Proposed algorithm0.97700.94570.96091.68
    • Table 2. Comparison of cell segmentation results of sample images

      View table

      Table 2. Comparison of cell segmentation results of sample images

      ExampleAlgorithmGTENNTPNFPNFNPrecisionRecallF-score
      Fig. 82D-Otsu10459554990.08470.04810.0614
      Jaccard1261002640.79370.96150.8696
      Flight112981460.8750.94230.9074
      Vicar105102320.97140.98080.9761
      Proposed algorithm10599650.94290.95190.9474
      Fig. 92D-Otsu271227122152590.05290.04430.0482
      Jaccard20819315780.92790.71220.8058
      Flight27925920120.92830.95570.9418
      Vicar2072016600.97100.74170.8410
      Proposed algorithm2652605110.98110.95940.9701
      Fig. 102D-Otsu577291122795650.04120.02080.0277
      Jaccard22822533490.98680.38990.5590
      Flight59956039140.93480.97050.9524
      Vicar38037282050.97890.64470.7774
      Proposed algorithm57456410130.98250.97750.9800
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    Jingcheng Wu, Lulu Shi, Yanan Du, Luhong Wen, Zhenzhi Shi. Fast Segmentation Method of Cell Image Based on Dual-Gaussian Filtering[J]. Laser & Optoelectronics Progress, 2022, 59(2): 0210002

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    Paper Information

    Category: Image Processing

    Received: Jan. 26, 2021

    Accepted: Mar. 5, 2021

    Published Online: Dec. 23, 2021

    The Author Email: Shi Zhenzhi (shizhenzhi@nbu.edu.cn)

    DOI:10.3788/LOP202259.0210002

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