Laser & Optoelectronics Progress, Volume. 60, Issue 2, 0217002(2023)

Gland and Colonoscopy Segmentation Method Combining Self-Attention and Convolutional Neural Network

Jiabao Zhang and Zhiyong Xiao*
Author Affiliations
  • School of Artificial Intelligence and Computer Science, Jiangnan University, Wuxi 214122, Jiangsu , China
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    References(32)

    [1] Ronneberger O, Fischer P, Brox T. U-net: convolutional networks for biomedical image segmentation[M]. Navab N, Hornegger J, Wells W M, et al. Medical image computing and computer-assisted intervention-MICCAI 2015. Lecture notes in computer science, 9351, 234-241(2015).

    [2] Çiçek Ö, Abdulkadir A, Lienkamp S S et al. 3D U-net: learning dense volumetric segmentation from sparse annotation[M]. Ourselin S, Joskowicz L, Sabuncu M R, et al. Medical image computing and computer-assisted intervention-MICCAI 2016, 9901, 424-432(2016).

    [3] Milletari F, Navab N, Ahmadi S A. V-net: fully convolutional neural networks for volumetric medical image segmentation[C], 565-571(2016).

    [5] Xiao X, Lian S, Luo Z M et al. Weighted res-UNet for high-quality retina vessel segmentation[C], 327-331(2018).

    [6] Xiao Z Y, Du N M, Liu J J et al. SR-Net: a sequence offset fusion net and refine net for undersampled multislice MR image reconstruction[J]. Computer Methods and Programs in Biomedicine, 202, 105997(2021).

    [7] Xiao Z Y, He K H, Liu J J et al. Multi-view hierarchical split network for brain tumor segmentation[J]. Biomedical Signal Processing and Control, 69, 102897(2021).

    [8] Liu Y M, Xiao Z Y. Automatic segmentation algorithm of liver tumor based on feature fusion[J]. Laser & Optoelectronics Progress, 58, 1417001(2021).

    [10] Hu C, Kang G X, Hou B B et al. Acu-net: a 3D attention context U-Net for multiple sclerosis lesion segmentation[C], 1384-1388(2020).

    [11] Zhang W X, Zhu Z C, Zhang Y H et al. Cell image segmentation method based on residual block and attention mechanism[J]. Acta Optica Sinica, 40, 1710001(2020).

    [15] Gao Y H, Zhou M, Metaxas D N. UTNet: a hybrid transformer architecture for medical image segmentation[M]. de Bruijne M, Cattin P C, Cotin S, et al. Medical image computing and computer assisted intervention-MICCAI 2021. Lecture notes in computer science, 12903, 61-71(2021).

    [19] He K M, Zhang X Y, Ren S Q et al. Deep residual learning for image recognition[C], 770-778(2016).

    [20] Szegedy C, Liu W, Jia Y Q et al. Going deeper with convolutions[C], 15523970(2015).

    [21] Lou A G, Guan S Y, Loew M. DC-UNet: rethinking the U-Net architecture with dual channel efficient CNN for medical image segmentation[J]. Proceedings of SPIE, 11596, 758-768(2021).

    [23] Liu Z, Lin Y T, Cao Y et al. Swin transformer: hierarchical vision transformer using shifted windows[C], 9992-10002(2021).

    [25] Rivière B, Hönig W, Yue Y S et al. GLAS: global-to-local safe autonomy synthesis for multi-robot motion planning with end-to-end learning[J]. IEEE Robotics and Automation Letters, 5, 4249-4256(2020).

    [26] Jha D, Smedsrud P H, Riegler M A et al. Kvasir-SEG: A segmented polyp dataset[M]. Ro Y M, Cheng W H, Kim J, et al. MultiMedia modeling. Lecture notes in computer science, 11962, 451-462(2019).

    [29] Graham S, Epstein D, Rajpoot N. Rota-net: rotation equivariant network for simultaneous gland and lumen segmentation in colon histology images[M]. Reyes-Aldasoro C C, Janowczyk A, Veta M, et al. Digital pathology, 11435, 109-116(2019).

    [31] Jha D, Ali S, Tomar N K et al. Real-time polyp detection, localization and segmentation in colonoscopy using deep learning[J]. IEEE Access, 9, 40496-40510(2021).

    [32] Bernal J, Sánchez F J, Fernández-Esparrach G et al. WM-DOVA maps for accurate polyp highlighting in colonoscopy: validation vs. saliency maps from physicians[J]. Computerized Medical Imaging and Graphics, 43, 99-111(2015).

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    Jiabao Zhang, Zhiyong Xiao. Gland and Colonoscopy Segmentation Method Combining Self-Attention and Convolutional Neural Network[J]. Laser & Optoelectronics Progress, 2023, 60(2): 0217002

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    Paper Information

    Category: Medical Optics and Biotechnology

    Received: Oct. 9, 2021

    Accepted: Nov. 16, 2021

    Published Online: Jan. 6, 2023

    The Author Email: Xiao Zhiyong (zhiyong.xiao@jiangnan.edu.cn)

    DOI:10.3788/LOP212696

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