Chinese Physics B, Volume. 29, Issue 9, (2020)
Oscillation of S5 helix under different temperatures in determination of the open probability of TRPV1 channel
[1] K Venkatachalam, C Montell. Annu. Rev. Biochem, 76, 387(2007).
[2] I S Ramsey, M Delling, D E Clapham. Annu. Rev. Physiol, 68, 619(2006).
[3] W P Winn, P J Conlon, K L Lynn, M K Farrington, T Creazzo, A F Hawkins, N Daskalakis, S Y Kwan, S Ebersviller, J L Burchette, M A Pericak-Vance, D N Howell, J M Vance, P B Rosenberg. Science, 308, 1801(2005).
[4] J Reiser, K R Polu, C C Möller, P Kenlan, M M Altintas, C Wei, C Faul, S Herbert, I Villegas, C Avila-Casado, M McGee, H Sugimoto, D Brown, R Kalluri, P Mundel, P L Smith, D E Clapham, M R Pollak. Nat. Genet, 37, 739(2005).
[5] R Y Walder, D Landau, P Meyer, H Shalev, M Tsolia, Z Borochowitz, M B Boettger, G E Beck, R K Englehardt, R Carmi, V C Sheffied. Nat. Genet, 31, 171(2002).
[6] K P Schlingmann, S Weber, M Peters, L N Nejsum, H Vitzthum, K Klingel, M Kratz, E Haddad, E Ristoff, D Dinour, M Syrrou, S Nielsen, M Sassen, S Waldegger, H W Seyberth, M Konrad. Nat. Genet, 31, 166(2002).
[7] B R Myers, C J Bohlen, D Julius. Neuron, 58, 362(2008).
[8] F Yang, Y Cui, K Wang, J Zheng. Proc. Natl. Acad. Sci. USA, 107, 7083(2010).
[9] P V Lishko, E Procko, X Jin, C B Phelps, R Gaudet. Neuron, 54, 905(2007).
[10] D E Clapham. Nature, 426, 517(2003).
[11] J Zheng. Compr. Physiol, 3, 221(2013).
[12] F Yang, J Zheng. ELife, 3(2014).
[13] M J Caterina, M A Schumacher, M Tominaga, T A Rosen, J D Levine, D Julius. Nature, 389, 816(1997).
[14] S Brauchi, G Orta, M Salazar, E Rosenmann, R Latorre. J. Neurosci, 26, 4835(2006).
[15] B Liu, K Hui, F Qin. Biophys. J, 85, 2988(2003).
[16] X Steinberg, C Lespay-Rebolledo, S Brauchi. Front. Physiol, 5, 171(2014).
[17] C J Bohlen, A Priel, S Zhou, D King, J Siemens, D Julius. Cell, 141, 834(2010).
[18] S Yang, F Yang, N Wei, J Hong, B Li, L Luo, M Rong, V Yarov-Yarovoy, J Zheng, K Wang, R Lai. Nat. Commun, 6, 8297(2015).
[19] X Cao, L Ma, F Yang, K Wang, J Zheng. J. Gen. Physiol, 143, 75(2014).
[20] F Yang, L Ma, X Cao, K Wang, J Zheng. J. Gen. Physiol, 143, 91(2014).
[21] M J Caterina, A Leffler, A B Malmberg, W J Martin, J Trafton, K R Petersen-Zeitz, M Koltzenburg, A I Basbaum, D Julius. Science, 288, 306(2000).
[22] J B Davis, J Gray, M J Gunthorpe, J P Hatcher, P T Davey, P Overend, M H Harries, J Latcham, C Clapham, K Atkinson, S A Hughes, K Rance, E Grau, A J Harper, P L Pugh, D C Rogers, S Bingham, A Randall, S A Sheardown. Nature, 405, 183(2000).
[23] D Julius. Annu. Rev. Cell Dev. Biol, 29, 355(2013).
[24] J Grandl, S E Kim, V Uzzell, B Bursulaya, M Petrus, M Bandell, A Patapoutian. Nat. Neurosci, 13, 708(2010).
[25] K Susankova, R Ettrich, L Vyklicky, J Teisinger, V Vlachova. J. Neurosci, 27, 7578(2007).
[26] M Papakosta, C Dalle, A Haythornthwaite, L Cao, E B Stevens, G Burgess, R Russell, S C Cox, S C Phillips, C Grimm. J. Biol. Chem, 286(2011).
[27] S E Kim, A Patapoutian, J Grandl. PLoS ONE, 8(2013).
[28] S Brauchi, P Orio, R Latorre. Proc. Natl. Acad. Sci. USA, 101(2004).
[29] J Yao, B Liu, F Qin. Proc. Natl. Acad. Sci. USA, 108(2011).
[30] J Yao, B Liu, F Qin. Biophys. J, 99, 1743(2010).
[31] S Chowdhury, B W Jarecki, B Chanda. Cell, 158, 1148(2014).
[32] T Voets, G Droogmans, U Wissenbach, A Janssens, V Flockerzi, B Nilius. Nature, 430, 748(2004).
[33] E Cao, M Liao, Y Cheng, D Julius. Nature, 504, 113(2013).
[34] M Liao, E Cao, D Julius, Y Cheng. Nature, 504, 107(2013).
[35] W Zheng, F Qin. J. Gen. Physiol, 145, 443(2015).
[36] H Wen, F Qing, W Zheng. Proteins, 84, 1938(2016).
[37] H Wen, W Zheng. Biophys. J, 114, 40(2018).
[38] A O Chugunov, P E Volynsky, N A Krylov, D E Nolde, R G Efremov. Sci. Rep, 6(2016).
[39] S M Hanson, S Newstead, K J Swartz, S P Sansom. Biophys. J, 108, 1425(2015).
[40] W Humphrey, A Dalke, K Schulten. J. Mol. Graph, 14, 33(1996).
[41] W L Jorgensen, J Chandrasekhar, J D Madura, R W Impey, M L Klein. J. Chem. Phys, 79, 926(1983).
[42] J C Phillips, R Braun, W Wang, J Gumbart, E Tajkhorshid, E Villa, C Chipot, R D Skeel, L Kalé, K Schulten. J. Comput. Chem, 26, 1781(2005).
[43] R B Best, X Zhu, J Shim, P E M Lopes, J Mittal, M Feig, A D MacKerell. J. Chem. Theory Comput, 8, 3257(2012).
[44] A D MacKerell, D Bashford, M Bellott et al. J. Phys. Chem. B, 102, 3586(1998).
[45] A D MacKerell, M Feig, C L Brooks. J. Am. Chem. Soc, 126, 698(2004).
[46] J J Pavelites, J Gao, P A Bash, A D MacKerell. J. Comput. Chem, 18, 221(1997).
[47] A Bakan, L M Meireles, I Bahar. Bioinformatics, 27, 1575(2011).
[48] A Bakan, A Dutta, W Mao, Y Liu, C Chennubhotla, T R Lezon, I Bahar. Bioinformatics, 30, 2681(2014).
[49] Z Pan, J Chen, G Lü, Y Geng, H Zhang, Q Ji. J. Chem. Phys, 136(2012).
[50] H Salazar, A Jara-Oseguera, E Hernández-García, I Llorente, I I Arias-Olguín, , L D Islas, T Rosenbaum. Nat. Struct. Mol. Biol, 16, 704(2009).
[51] L Gregorio-Teruel, P Valente, J M González-Ros, G Fernández-Ballester, A Ferrer-Montiel. J. Gen. Physiol, 143, 361(2014).
[52] L Darré, S Furini, C Domene. J. Mol. Biol, 427, 537(2015).
[53] O S Smart, J G Neduvelil, X Wang, B A Wallace, M S Sansom. J. Mol. Graph, 14, 354(1996).
[54] S E Jordt, D Julius. Cell, 108, 421(2002).
[55] F Yang, X Xiao, W Cheng, W Yang, P Yu, Z Song, V Yarov-Yarovoy, J Zheng. Nat. Chem. Biol, 11, 518(2015).
[56] V Vlachová, J Teisinger, K Sušánková, A Lyfenko, R Ettrich, L Vyklický. J. Neurosci, 23, 1340(2003).
[57] B Liu, W Ma, S Ryu, F Qin. J. Physiol, 560, 627(2004).
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Tie Li, Jun-Wei Li, Chun-Li Pang, Hailong An, Yi-Zhao Geng, Jing-Qin Wang. Oscillation of S5 helix under different temperatures in determination of the open probability of TRPV1 channel[J]. Chinese Physics B, 2020, 29(9):
Received: Apr. 24, 2020
Accepted: --
Published Online: Apr. 29, 2021
The Author Email: Geng Yi-Zhao (jqwang@hebut.edu.cn)