Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model

Haiqiang Zhang; Yong Li; Cheng Xiang

doi:10.3788/LOP222411

Laser & Optoelectronics Progress, Volume. 60, Issue 16, 1617001(2023)

Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model

Haiqiang Zhang¹, Yong Li^1、*, and Cheng Xiang²

¹Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming 650550, Yunnan, China

²Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650550, Yunnan, China

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Fig. 1. Analysis of mass spectrometry data based on Flex-Bootstrap and neural network fusion model

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Fig. 2. Flow chart of CNN and DNN fusion model

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Fig. 3. Flow chart of Multi-CNN and DNN fusion model

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Fig. 4. Accuracy and loss function curve

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Table 1. Accuracy of each model in different Lr
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Table 1. Accuracy of each model in different Lr
Model DNN CNN and DNN fusion Multi-CNN and DNN fusion
Accuracy（Lr is 0.001） 83.75 85.42 90.71
Accuracy（Lr is 0.0001） 89.52 92.27 98.82

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Haiqiang Zhang, Yong Li, Cheng Xiang. Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model[J]. Laser & Optoelectronics Progress, 2023, 60(16): 1617001

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