Acta Optica Sinica, Volume. 34, Issue 1, 100001(2014)
Progresses of X-Ray Imaging Methodology and Its Applications at Shanghai Synchrotron Radiation Facility
[1] [1] W C Rntgen. On a new kind of rays [J]. Nature, 1896, 53(1369): 274-276.
[2] [2] H E Martz, C M Logan, D J Schneberk, et al.. X-Ray Imaging: Fundamentals, Industrial Techniques, and Applications [M]. Boca Raton: CRC Press, 2013.
[3] [3] T Q Xiao, A Bergamaschi, D Dreossi, et al.. Effect of spatial coherence on application of in-line phase contrast imaging to synchrotron radiation mammography [J]. Nucl Instrum Meth A, 2004, 548(1-2): 155-162.
[4] [4] P Willmott. An Introduction to Synchrotron Radiation: Techniques and Applications [M]. New York: John Wiley & Sons, 2011.
[5] [5] A Momose. Demonstration of phase-contrast X-ray computed-tomography using an X-ray interferometer [J]. Nucl Instrum Meth A, 1995, 352(3): 622-628.
[6] [6] T J Davis, D Gao, T E Gureyev, et al.. Phase-contrast imaging of weakly absorbing materials using hard X-rays [J]. Nature, 1995, 373(6515): 595-598.
[7] [7] T Weitkamp, A Diaz, B Nohammer, et al.. Hard X-ray phase imaging and tomography with a grating interferometer [C]. SPIE, 2004, 5535: 137-142.
[8] [8] S W Wilkins, T E Gureyev, D Gao, et al.. Phase-contrast imaging using polychromatic hard X-rays [J]. Nature, 1996, 384(6607): 335-338.
[9] [9] K A Nugent, T E Gureyev, D F Cookson, et al.. Quantitative phase imaging using hard X-rays [J]. Phys Rev Lett, 1996, 77(14): 2961-2964.
[10] [10] T E Gureyev, S W Wilkins. On X-ray phase retrieval from polychromatic images [J]. Opt Commun, 1998, 147(4-6): 229-232.
[11] [11] P Cloetens, W Ludwig, J Baruchel, et al.. Holotomography: quantitative phase tomography with micrometer resolution using hard synchrotron radiation X-rays [J]. Appl Phys Lett, 1999, 75(19): 2912-2914.
[12] [12] M W Westneat, O Betz, R W Blob, et al.. Tracheal respiration in insects visualized with synchrotron X-ray imaging [J]. Science, 2003, 299(5606): 558-560.
[13] [13] H Y Lu, Y T Wang, X S He, et al.. Netrin-1 hyper expression in mouse brain promotes angiogenesis and long-term neurological recovery after transient focal ischemia [J]. Stroke, 2012, 43(3): 838-843.
[14] [14] T M Wang, J J Xu, T Q Xiao, et al.. Evolution of dendrite morphology of a binary alloy under an applied electric current: an in situ observation [J]. Phys Rev E, 2010, 81(4): 042601.
[15] [15] Q Dong, J Zhang, J F Dong, et al.. Anaxial columnar dendrites in directional solidification of an Al-15 wt.% Cu alloy [J]. Materials Letters, 2011, 65(21-22): 3295-3297.
[16] [16] Q Dong, J Zhang, J F Dong, et al.. In situ observation of columnar-to-equiaxed transition in directional solidification using synchrotron X-radiation imaging technique [J]. Materials Science and Engineering A, 2011, 530: 271-276.
[17] [17] W Jin, B B Chen, J Y Li, et al.. TIEG1 inhibits breast cancer invasion and metastasis by inhibition of epidermal growth factor receptor (EGFR) transcription and the EGFR signaling pathway [J]. Mol Cell Biol, 2012, 32(1): 50-63.
[18] [18] C L Dai, H Guo, J X Lu, et al.. Osteogenic evaluation of calcium/magnesium-doped mesoporous silica scaffold with incorporation of rhBMP-2 by synchrotron radiation-based μCT [J]. Biomaterials, 2011, 32(33): 8506-8517.
[19] [19] F Yang, J Wang, J Hou, et al.. Bone regeneration using cell-mediated responsive degradable PEG-based scaffolds incorporating with rhBMP-2 [J]. Biomaterials, 2013, 34(5): 1514-1528.
[20] [20] Y Jiang, Y Tong, S Lu. Visualizing the three-dimensional mesoscopic structure of dermal tissues [J]. Journal of Tissue Engineering and Regenerative Medicine, 2012, doj: 10.1002/term.1579.
[21] [21] F Xu, Y Li, X Hu, et al.. In situ investigation of metal's microwave sintering [J]. Materials Letters, 2012, 67(1): 162-164.
[22] [22] X G Zhang, B R Pratt. The first stalk-eyed phosphatocopine crustacean from the lower cambrian of China [J]. Curr Biol, 2012, 22(22): 2149-2154.
[23] [23] H Zhou, X H Peng, E Perfect, et al.. Effects of organic and inorganic fertilization on soil aggregation in an Ultisol as characterized by synchrotron based X-ray micro-computed tomography [J]. Geoderma, 2013, 195-196: 23-30.
[24] [24] H Zhou, X Peng, S Peth, et al.. Effects of vegetation restoration on soil aggregate microstructure quantified with synchrotron-based micro-computed tomography [J]. Soil & Tillage Research, 2012, 124: 17-23.
[25] [25] Li Zhilong, Wu Zhijun, Gao Yuan, et al.. Measurement method for diesel nozzle internal geometry and size using high-energy synchrotron radiation X-ray [J]. Journal of Jilin University(Engineering and Technology Edition), 2011, 41(1): 128-132.
[26] [26] R C Chen, H L Xie, L Rigon, et al.. Phase retrieval in quantitative X-ray microtomography with a single sample-to-detector distance [J]. Opt Lett, 2011, 36(9): 1719-1721.
[27] [27] Liu Huiqiang, Wang Yudan, Ren Yuqi, et al.. Investigation on X-ray micro-computed tomography suitable for organic compound samples based on modifed bronnikov algorithm [J]. Acta Optica Sinica, 2012, 32(4): 0434001.
[28] [28] R C Chen, L Rigon, R Longo. Comparison of single distance phase retrieval algorithms by considering different object composition and the effect of statistical and structural noise [J]. Opt Express, 2013, 21(6): 7384-7399.
[29] [29] H Liu, Y Ren, H Guo, et al.. Phase retrieval for hard X-ray computed tomography of samples with hybrid compositions [J]. Chin Opt Lett, 2012, 10(12): 121101.
[30] [30] Y Q Ren, C Chen, R C Chen, et al.. Optimization of image recording distances for quantitative X-ray in-line phase contrast imaging [J]. Opt Express, 2011, 19(5): 4170-4181.
[31] [31] Ren Yuqi, Zhou Guangzhao, Wang Yudan, et al.. Study of multi-component sample using quantitative X-ray phase contrast imaging [J]. Acta Optica Sinica, 2011, 31(8): 0834002.
[32] [32] Liu Lixiang, Du Guohao, Hu Wen, et al.. Effect of some factors on imaging quality of X-ray in-line outline imaging [J]. Acta Physica Sinica, 2007, 56(8): 4556-4564.
[33] [33] Liu Lixiang, Du Guohao, Hu Wen, et al.. Application of quantitative imaging to elimination of scattering effect on X-ray in-line outline imaging [J]. Acta Physica Sinica, 2006, 55(12): 6387-6394.
[34] [34] B Deng, Q Yang, H L Xie, et al.. First X-ray fluorescence CT experimental results at the SSRF X-ray imaging beamline [J]. Chinese Phys C, 2011, 35(4): 402-404.
[35] [35] Yang Qun, Deng Biao, Lü Weiwei, et al.. Nondestructive imaging of elements distribution in biomedical samples by X-ray fluorescence computed tomography [J]. Spectroscopy and Spectral Analysis, 2011, (10): 2753-2757.
[36] [36] Zhou Guangzhao, Tong Yajun, Chen Can, et al.. Digital simulation for coherent X-ray diffractive imaging [J]. Acta Physica Sinica, 2011, 60(2): 028701.
[37] [37] Zhou Guangzhao, Wang Yudan, Ren Yuqi, et al.. Digital simulation for 3D reconstruction of coherent X-ray diffractive imaging [J]. Acta Physica Sinica, 2012, 61(1): 018701.
[38] [38] Wang Yudan, Peng Guanyu, Tong Yajun, et al.. Effects of some factors on X-ray spiral micro-computed tomography at synchrotron radiation [J]. Acta Physica Sinica, 2012, 61(5): 054205.
[40] [40] Shen Fei, Chen Rongchang, Xiao Tiqiao. GPU-based parallel computing for fast image reconstruction in micro CT [J]. Nucl Tech, 2011, 34(6): 401-405.
[41] [41] R C Chen, D Dreossi, L Mancini, et al.. PITRE: software for phase-sensitive X-ray image processing and tomography reconstruction [J]. Journal of Synchrotron Radiation, 2012, 19: 836-845.
[42] [42] P Cloetens, R Barrett, J Baruchel, et al.. Phase objects in synchrotron radiation hard X-ray imaging [J]. J Phys D Appl Phys, 1996, 29(1): 133-146.
[43] [43] J Baruchel, P Bleuet, A Bravin, et al.. Advances in synchrotron hard X-ray based imaging [J]. Cr Phys, 2008, 9(5-6): 624-641.
[44] [44] C Raven, A Snigirev, I Snigireva, et al.. Phase-contrast microtomography with coherent high-energy synchrotron X-rays [J]. Appl Phys Lett, 1996, 69(13): 1826-1828.
[45] [45] A Groso, R Abela, M Stampanoni. Implementation of a fast method for high resolution phase contrast tomography [J]. Opt Express, 2006, 14(18): 8103-8110.
[46] [46] M A Beltran, D M Paganin, K Uesugi, et al.. 2D and 3D X-ray phase retrieval of multi-material objects using a single defocus distance [J]. Opt Express, 2010, 18(7): 6423-6436.
[47] [47] D Paganin, S C Mayo, T E Gureyev, et al.. Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object [J]. J Microsc-oxford, 2002, 206: 33-40.
[48] [48] R C Chen, L Rigon, R Longo. Quantitative 3D refractive index decrement reconstruction using single-distance phase-contrast tomography data [J]. J Phys D Appl Phys, 2011, 44(49): 495401.
[49] [49] A V Bronnikov. Theory of quantitative phase-contrast computed tomography [J]. J Opt Soc Am A, 2002, 19(3): 472-480.
[50] [50] T E Gureyev, T J Davis, A Pogany, et al.. Optical phase retrieval by use of first Born-and Rytov-type approximations [J]. Appl Opt, 2004, 43(12): 2418-2430.
[51] [51] C Y Chou, Y Huang, D Shi, et al.. Image reconstruction in quantitative X-ray phase-contrast imaging employing multiple measurements [J]. Opt Express, 2007, 15(16): 10002-10025.
[52] [52] D Paganin, A Barty, P J McMahon, et al.. Quantitative phase-amplitude microscopy. III. The effects of noise [J]. J Microsc-oxford, 2004, 214(1): 51-61.
[53] [53] J Bigot, F Gamboa, M Vimond. Estimation of translation, rotation, and scaling between noisy images using the Fourier-Mellin transform [J]. Siam Journal on Imaging Sciences, 2009, 2(2): 614-645.
[54] [54] R C González. Digital Image Processing [M]. Boston: Addison-Wesley, 2002.
[55] [55] L Mandel, E Wolf. Spectral coherence and the concept of cross-spectral purity [J]. J Opt Soc Am, 1976, 66(6): 529-535.
[56] [56] B Golosio, A Somogyi, A Simionovici, et al.. Nondestructive three-dimensional elemental microanalysis by combined helical X-ray microtomographies [J]. Appl Phys Lett, 2004, 84(12): 2199-2201.
[57] [57] M D de Jonge, C Holzner, S B Baines, et al.. Quantitative 3D elemental microtomography of cyclotella meneghiniana at 400-nm resolution [J]. P Natl Acad Sci Usa, 2010, 107(36): 15676-15680.
[58] [58] Y Hirai, A Yoneyama, A Hisada, et al.. In vivo X-ray fluorescence microtomographic imaging of elements in single-celled fern spores [J]. Synchrotron Radiation Instrumentation, Pts 1 and 2, 2007, 879: 1345-1348.
[59] [59] S A Kim, T Punshon, A Lanzirotti, et al.. Localization of iron in Arabidopsis seed requires the vacuolar membrane transporter VIT1 [J]. Science, 2006, 314(5803): 1295-1298.
[60] [60] E Lombi, M D de Jonge, E Donner, et al.. Fast X-ray fluorescence microtomography of hydrated biological samples [J]. Plos One, 2011, 6(6): e20626.
[61] [61] Q Yang, B Deng, W W Lü, et al.. Fast and accurate X-ray fluorescence computed tomography imaging with the ordered-subsets expectation maximization algorithm [J]. J Synchrotron Radiat, 2012, 19: 210-215.
[62] [62] J W Miao, P Charalambous, J Kirz, et al.. Extending the methodology of X-ray crystallography to allow imaging of micrometre-sized non-crystalline specimens [J]. Nature, 1999, 400(6742): 342-344.
[63] [63] I Robinson, R Harder. Coherent X-ray diffraction imaging of strain at the nanoscale [J]. Nat Mater, 2009, 8(4): 291-298.
[64] [64] H D Jiang, C Y Song, C C Chen, et al.. Quantitative 3D imaging of whole, unstained cells by using X-ray diffraction microscopy [J]. P Natl Acad Sci Usa, 2010, 107(25): 11234-11239.
[65] [65] G J Williams, H M Quiney, B B Dhal, et al.. Fresnel coherent diffractive imaging [J]. Phys Rev Lett, 2006, 97(2): 025506.
[66] [66] J M Rodenburg, A C Hurst, A G Cullis, et al.. Hard-X-ray lensless imaging of extended objects [J]. Phys Rev Lett, 2007, 98(3): 034801.
[67] [67] Y Takahashi, N Zettsu, Y Nishino, et al.. Three-dimensional electron density mapping of shape-controlled nanoparticle by focused hard X-ray diffraction microscopy [J]. Nano Letters, 2010, 10(5): 1922-1926.
[68] [68] J W Miao, Y Nishino, Y Kohmura, et al.. Quantitative image reconstruction of GaN quantum dots from oversampled diffraction intensities alone [J]. Phys Rev Lett, 2005, 95(8): 085503.
[69] [69] J R Fienup. Phase retrieval algorithms: a comparison [J]. Appl Opt, 1982, 21(15): 2758-2769.
[70] [70] H Hu. Multi-slice helical CT: scan and reconstruction [J]. Med Phys, 1999, 26(1): 5-18.
[71] [71] M Kachelrie. High performance exact spiral cone-beam CT image reconstruction [C]. 2nd Workshop on High Performance Image Reconstruction, 2009: 9-12.
[72] [72] D Mannes, F Marone, E Lehmann, et al.. Application areas of synchrotron radiation tomographic microscopy for wood research [J]. Wood Sci Technol, 2010, 44(1): 67-84.
[73] [73] F Forsberg, R Mooser, M Arnold, et al.. 3D micro-scale deformations of wood in bending: synchrotron radiation mu CT data analyzed with digital volume correlation [J]. J Struct Biol, 2008, 164(3): 255-262.
[74] [74] X Wei, T Q Xiao, L X Liu, et al.. Application of X-ray phase contrast imaging to microscopic identification of Chinese medicines [J]. Phys Med Biol, 2005, 50(18): 4277-4286.
[75] [75] Xue Yanling, Xiao Tiqiao, Wu Lihong, et al.. Investigation of characteristic microstructures of wild ginseng by X-ray phase contrast microscopy [J]. Acta Physica Sinica, 2010, 59(8): 5496-5507.
[76] [76] H Y Li, X Z Yin, J Q Ji, et al.. Microstructural investigation to the controlled release kinetics of monolith osmotic pump tablets via synchrotron radiation X-ray microtomography [J]. International Journal of Pharmaceutics, 2012, 427(2): 270-275.
[77] [77] R Liu, X Yin, H Li, et al.. Visualization and quantitative profiling of mixing and segregation of granules using synchrotron radiation X-ray microtomography and three dimensional reconstruction [J]. Int J Pharm, 2013, 445(1-2): 125-133.
[79] [79] Y Wang, Y Yang, I Cole, et al.. Investigation of the microstructure of an aqueously corroded zinc wire by data-constrained modelling with multi-energy X-ray CT [J]. Materials and Corrosion, 2013, 64(3): 180-184.
[80] [80] Y Wang, Y Yang, T Xiao, et al.. Synchrotron-based data-constrained modeling analysis of microscopic mineral distributions in limestone [J]. International Journal of Geosciences, 2013, 4(2): 344-351.
[81] [81] Ren Ren′an. Identificology of Chinese Traditional Medicine [M]. Shanghai: The Science & Technology Press in Shanghai, 1986.
[82] [82] Lou Zhicen, Li Shenghua, Wang Xuan. The Methods of Morphological and Microscopic Identification of Chinese Herbal Medicines [M]. Beijing: Beijing Medical University & Peking Union Medical College Press, 1997.
[83] [83] J Qiu. China plans to modernize traditional medicine [J]. Nature, 2007, 446(7136): 590-591.
[85] [85] Zhao Zhongzhen. An Illustrated Microscopic Identification of Chinese Materia Medica [M]. Shenyang: Liaoning Science and Technology Publishing House, 2005.
[86] [86] H P Yuan, H Fernandes, P Habibovic, et al.. Osteoinductive ceramics as a synthetic alternative to autologous bone grafting [J]. Proceedings of the National Academy of Sciences of the United States of America, 2010, 107(31): 13614-13619.
[87] [87] S Yang, S Furman, A Tulloh. A data-constrained 3D model for material compositional microstructures [J]. Advanced Materials Research, 2008, 32: 267-270.
[88] [88] Y S Yang, A Tulloh, I Cole, et al.. A data-constrained computational model for morphology structures [J]. Journal of the Australian Ceramics Society, 2007, 43(2): 159-164.
[89] [89] H J Vinegar, S L Wellington. Tomographic imaging of 3-phase flow experiments [J]. Review of Scientific Instruments, 1987, 58(1): 96-107.
[90] [90] Y S Yang, T E Gureyev, A Tulloh, et al.. Feasibility of a data-constrained prediction of hydrocarbon reservoir sandstone microstructures [J]. Measurement Science & Technology, 2010, 21(4): 047001.
[91] [91] S Yang, J Taylor. Model and data work together to reveal microscopic structures of materials [C]. SPIE, 2010: x42055.
[92] [92] Y S Yang, K Y Liu, S Mayo, et al.. A data-constrained modelling approach to sandstone microstructure characterisation [J]. J Petroleum Science & Technology, 2013, 105: 76-83.
[93] [93] I Cole, T Muster, D Lau, et al.. Products formed during the interaction of seawater droplets with zinc surfaces II, results from short exposures [J]. Journal of the Electrochemical Society, 2010, 157(6): C213-C222.
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Xiao Tiqiao, Xie Honglan, Deng Biao, Du Guohao, Chen Rongchang. Progresses of X-Ray Imaging Methodology and Its Applications at Shanghai Synchrotron Radiation Facility[J]. Acta Optica Sinica, 2014, 34(1): 100001
Category: Reviews
Received: Apr. 23, 2013
Accepted: --
Published Online: Jan. 9, 2014
The Author Email: Tiqiao Xiao (tqxiao@sinap.ac.cn)