Journal of Innovative Optical Health Sciences, Volume. 16, Issue 1, 2245004(2023)

A graphical user interface (GUI) for model-based radiation-induced acoustic computed tomography

Michelle Simon1、∥, Prabodh Kumar Pandey2、***∥, Leshan Sun1, and Liangzhong Xiang1,2,3、*
Author Affiliations
  • 1Department of Biomedical Engineering, Samueli School of Engineering, University of California, Irvine, CA 92617, USA
  • 2Department of Radiological Sciences, School of Medicine, University of California, Irvine, CA 92697, USA
  • 3Beckman Laser Institute & Medical Clinic, University of California, Irvine, CA 92612, USA
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    Radiation-induced acoustic computed tomography (RACT) is an evolving biomedical imaging modality that aims to reconstruct the radiation energy deposition in tissues. Traditional back-projection (BP) reconstructions carry noisy and limited-view artifacts. Model-based algorithms have been demonstrated to overcome the drawbacks of BPs. However, model-based algorithms are relatively more complex to develop and computationally demanding. Furthermore, while a plethora of novel algorithms has been developed over the past decade, most of these algorithms are either not accessible, readily available, or hard to implement for researchers who are not well versed in programming. We developed a user-friendly MATLAB-based graphical user interface (GUI; RACT2D) that facilitates back-projection and model-based image reconstructions for two-dimensional RACT problems. We included numerical and experimental X-ray-induced acoustic datasets to demonstrate the capabilities of the GUI. The developed algorithms support parallel computing for evaluating reconstructions using the cores of the computer, thus further accelerating the reconstruction speed. We also share the MATLAB-based codes for evaluating RACT reconstructions, which users with MATLAB programming expertise can further modify to suit their needs. The shared GUI and codes can be of interest to researchers across the globe and assist them in efficient evaluation of improved RACT reconstructions.Radiation-induced acoustic computed tomography (RACT) is an evolving biomedical imaging modality that aims to reconstruct the radiation energy deposition in tissues. Traditional back-projection (BP) reconstructions carry noisy and limited-view artifacts. Model-based algorithms have been demonstrated to overcome the drawbacks of BPs. However, model-based algorithms are relatively more complex to develop and computationally demanding. Furthermore, while a plethora of novel algorithms has been developed over the past decade, most of these algorithms are either not accessible, readily available, or hard to implement for researchers who are not well versed in programming. We developed a user-friendly MATLAB-based graphical user interface (GUI; RACT2D) that facilitates back-projection and model-based image reconstructions for two-dimensional RACT problems. We included numerical and experimental X-ray-induced acoustic datasets to demonstrate the capabilities of the GUI. The developed algorithms support parallel computing for evaluating reconstructions using the cores of the computer, thus further accelerating the reconstruction speed. We also share the MATLAB-based codes for evaluating RACT reconstructions, which users with MATLAB programming expertise can further modify to suit their needs. The shared GUI and codes can be of interest to researchers across the globe and assist them in efficient evaluation of improved RACT reconstructions.

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    Michelle Simon, Prabodh Kumar Pandey, Leshan Sun, Liangzhong Xiang. A graphical user interface (GUI) for model-based radiation-induced acoustic computed tomography[J]. Journal of Innovative Optical Health Sciences, 2023, 16(1): 2245004

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    Paper Information

    Category: Research Articles

    Received: Sep. 14, 2022

    Accepted: Dec. 15, 2022

    Published Online: Feb. 21, 2023

    The Author Email: Pandey Prabodh Kumar (prabodhphyee@gmail.com), Xiang Liangzhong (pkpandey@hs.uci.edu)

    DOI:10.1142/S1793545822450043

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