Journal of Innovative Optical Health Sciences, Volume. 16, Issue 2, 2244003(2023)

Automated apoptosis identification in fluorescence imaging of nucleus based on histogram of oriented gradients of high-frequency wavelet coefficients

Shutong Liu1,2, Limei Su1,2, Han Sun1,2, Tongsheng Chen1,2,4, Min Hu3、*, and Zhengfei Zhuang1,2、**
Author Affiliations
  • 1MOE Key Laboratory of Laser Life Science and Institute of Laser Life Science, College of Biophotonics, South China Normal University, Guangzhou 510631, P. R. China
  • 2Guangdong Provincial Key Laboratory of Laser Life Science, College of Biophotonics, South China Normal University, Guangzhou 510631, P. R. China
  • 3Guangdong Provincial Key Laboratory of Nanophotonic Functional Materials and Devices School of Information and Optoelectronic Science and Engineering, South China Normal University, Guangzhou 510631, P. R. China
  • 4SCNU Qingyuan Institute of Science and Technology Innovation Co., Ltd., Qingyuan 511500, P. R. China
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    The automatic and accurate identification of apoptosis facilitates large-scale cell analysis. Most identification approaches using nucleus fluorescence imaging are based on specific morphological parameters. However, these parameters cannot completely describe nuclear morphology, thus limiting the identification accuracy of models. This paper proposes a new feature extraction method to improve the performance of the model for apoptosis identification. The proposed method uses a histogram of oriented gradient (HOG) of high-frequency wavelet coefficients to extract internal and edge texture information. The HOG vectors are classified using support vector machine. The experimental results demonstrate that the proposed feature extraction method well performs apoptosis identification, attaining 95.7% accuracy with low cost in terms of time. We confirmed that our method has potential applications to cell biology research.The automatic and accurate identification of apoptosis facilitates large-scale cell analysis. Most identification approaches using nucleus fluorescence imaging are based on specific morphological parameters. However, these parameters cannot completely describe nuclear morphology, thus limiting the identification accuracy of models. This paper proposes a new feature extraction method to improve the performance of the model for apoptosis identification. The proposed method uses a histogram of oriented gradient (HOG) of high-frequency wavelet coefficients to extract internal and edge texture information. The HOG vectors are classified using support vector machine. The experimental results demonstrate that the proposed feature extraction method well performs apoptosis identification, attaining 95.7% accuracy with low cost in terms of time. We confirmed that our method has potential applications to cell biology research.

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    Shutong Liu, Limei Su, Han Sun, Tongsheng Chen, Min Hu, Zhengfei Zhuang. Automated apoptosis identification in fluorescence imaging of nucleus based on histogram of oriented gradients of high-frequency wavelet coefficients[J]. Journal of Innovative Optical Health Sciences, 2023, 16(2): 2244003

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    Paper Information

    Category: Research Articles

    Received: Mar. 18, 2022

    Accepted: Jun. 5, 2022

    Published Online: Mar. 31, 2023

    The Author Email: Hu Min (hmin@scnu.edu.cn), Zhuang Zhengfei (zhuangzf@scnu.edu.cn)

    DOI:10.1142/S1793545822440035

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