Laser & Optoelectronics Progress, Volume. 60, Issue 1, 0130003(2023)

Raman Spectral Classification of Pathogenic Bacteria Based on Dense Connection Network Model

Yong Yang1,2, Hao Dong1,2, Yaoshuo Sang1,2, Zhigang Li1,2, Long Zhang1,2, Ling Wang1, and Shu Wang1,2、*
Author Affiliations
  • 1Anhui Institute of Optics and Fine Mechanics, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, Anhui, China
  • 2Science Island Branch of Graduate School, University of Science and Technology of China, Hefei 230031, Anhui, China
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    Bacterial Raman spectrum is characterized by a weak signal, high similarity, and susceptibility to noise. Its classification using traditional machine learning approaches requires complex spectral preprocessing, and the efficiency is low. In this study, to enhance the accuracy and efficiency of bacterial Raman spectral classification, a one-dimensional convolutional neural network model Raman-net based on dense connection is suggested, which could efficiently complete spectral classification without additional spectral preprocessing. The experimental findings demonstrate that the classification accuracy of Raman-net for 30 bacterial low-signal-to-noise ratios Raman spectra in the Bacteria-ID public data set is 84.26%, which is substantially higher than that of traditional machine learning approaches and comparison approaches. Raman-net attained a classification accuracy of 99.16% for surface-enhanced Raman spectroscopy of 2 Klebsiella pneumoniae susceptible and resistant to carbapenems. This demonstrates that Raman-net can attain remarkable classification findings for ordinary Raman spectroscopy and surface-improved Raman spectroscopy of bacteria without spectral preprocessing, and offers a fast and efficient approach for Raman spectroscopy identification of pathogenic bacteria.

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    Yong Yang, Hao Dong, Yaoshuo Sang, Zhigang Li, Long Zhang, Ling Wang, Shu Wang. Raman Spectral Classification of Pathogenic Bacteria Based on Dense Connection Network Model[J]. Laser & Optoelectronics Progress, 2023, 60(1): 0130003

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    Paper Information

    Category: Spectroscopy

    Received: Nov. 14, 2021

    Accepted: Dec. 21, 2021

    Published Online: Jan. 3, 2023

    The Author Email: Wang Shu (228690590@qq.com)

    DOI:10.3788/LOP213226

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